RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ATG16L1Q676U5 607 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ABRAQ8N0Z2 381 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 C4orf33Q8N1A6 199 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 NIPA2Q8N8Q9 360 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ATP11CQ8NB49 1132 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 C12orf42Q96LP6 360 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 WDR18Q9BV38 432 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 UBE2TQ9NPD8 197 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 HACD3Q9P035 362 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PRKAG3Q9UGI9 489 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DNALI1O14645 258 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TP73O15350 636 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 KRT7P08729 469 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CD19P15391 556 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DSG1Q02413 1049 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 OCA2Q04671 838 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 BLMHQ13867 455 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 TFDP2Q14188 446 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ARMCX6Q7L4S7 300 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PALB2Q86YC2 1186 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 KIAA2013Q8IYS2 634 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RCOR2Q8IZ40 523 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 ENDOVQ8N8Q3 282 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CLMNQ96JQ2 1002 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 FAM210AQ96ND0 272 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DCLK3Q9C098 648 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 DCLRE1BQ9H816 532 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RNPEPL1Q9HAU8 725 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 SMYD2Q9NRG4 433 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RSPH10B2B2RC85 870 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 XPO1O14980 1071 aaKnown RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 AHCYL1O43865 530 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CFBP00751 764 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 RSPH10BP0C881 870 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PYGMP11217 842 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 CDH5P33151 784 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PSMD7P51665 324 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 PDIK1LQ8N165 341 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 KCNH7Q9NS40 1196 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 EPS15L1Q9UBC2 864 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 LRRC42Q9Y546 428 aa5.72□□□□□ -1.49
PTPRD-205ENST00000397611 COPEO14579 308 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 S100BP04271 92 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 NOP14P78316 857 aaKnown RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 TAZQ16635 292 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC142Q17RM4 750 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 RABGAP1LQ5R372 815 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 AGAP11Q8TF27 550 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 GFM2Q969S9 779 aaKnown RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC127Q96BQ5 260 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 KREMEN1Q96MU8 473 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 DNAI2Q9GZS0 605 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 WARS2Q9UGM6 360 aaKnown RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 MROH7Q68CQ1 1323 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 IQANK1A0A1B0GTG1 560 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 DYTNA2CJ06 578 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 SEC24DO94855 1032 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 ZBED8Q8IZ13 594 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 DDX1Q92499 740 aaKnown RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 GJD4Q96KN9 370 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 TRABDQ9H4I3 376 aa5.71□□□□□ -1.49
PTPRD-205ENST00000397611 DHX33Q9H6R0 707 aaKnown RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 CORO1CQ9ULV4 474 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC88AQ3V6T2 1871 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TM9SF1O15321 606 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 EFNA5P52803 228 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 RSBN1LQ6PCB5 846 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-205ENST00000397611 CENPUQ71F23 418 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 CRLF3Q8IUI8 442 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC138Q96M89 665 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 RBM15Q96T37 977 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPRD-205ENST00000397611 SERPINI1Q99574 410 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 NAT9Q9BTE0 207 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 PCIF1Q9H4Z3 704 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 SLC38A10Q9HBR0 1119 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TMOD4Q9NZQ9 345 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TBX20Q9UMR3 447 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 MGEA5O60502 916 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 ATP6V1B1P15313 513 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 GCLMP48507 274 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 KRT17Q04695 432 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 HIC1Q14526 733 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TRIP10Q15642 601 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 DACT3Q96B18 629 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-205ENST00000397611 CSRNP1Q96S65 589 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TBC1D23Q9NUY8 699 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 STRCQ7RTU9 1775 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 MAN1A2O60476 641 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TJP3O95049 919 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 PECAM1P16284 738 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-205ENST00000397611 STAT3P40763 770 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 TBCCQ15814 346 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 ARL10Q8N8L6 244 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 PYROXD1Q8WU10 500 aa5.71□□□□□ -1.5
PTPRD-205ENST00000397611 NUP85Q9BW27 656 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms