RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 GSPT2Q8IYD1 628 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 GSTCDQ8NEC7 633 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CCDC26Q8TAB7 109 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF564Q8TBZ8 553 aaPredicted RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SEPT8Q92599 483 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 FAXDC2Q96IV6 333 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 RNPC3Q96LT9 517 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 TSPAN18Q96SJ8 248 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ZMYND15Q9H091 742 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 MIOSQ9NXC5 875 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 PCDHA3Q9Y5H8 950 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 WEE2P0C1S8 567 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 CD58P19256 250 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 CTNNA1P35221 906 aaKnown RBP16.3■□□□□ 0.2
PPM1F-202ENST00000397495 ASPAP45381 313 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 SCNN1GP51170 649 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF132P52740 706 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
PPM1F-202ENST00000397495 TCTN1Q2MV58 587 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 C9orf57Q5W0N0 161 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 SH3GL2Q99962 352 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
PPM1F-202ENST00000397495 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
PPM1F-202ENST00000397495 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 INPP5FQ9Y2H2 1132 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
PPM1F-202ENST00000397495 POLR3GO15318 223 aaPredicted RBP16.29■□□□□ 0.2
PPM1F-202ENST00000397495 FGGP02679 453 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 THP07101 528 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 COMTP21964 271 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 MRPS25P82663 173 aaKnown RBP16.29■□□□□ 0.2
PPM1F-202ENST00000397495 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
PPM1F-202ENST00000397495 KLHL7Q8IXQ5 586 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 IQCKQ8N0W5 287 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF653Q96CK0 615 aa16.29■□□□□ 0.2
PPM1F-202ENST00000397495 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.29■□□□□ 0.2
PPM1F-202ENST00000397495 ENPP3O14638 875 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 POMCP01189 267 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CALCAP01258 141 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CYP3A5P20815 502 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 ECHS1P30084 290 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 APBB2Q92870 758 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 AP1M1Q9BXS5 423 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 DDX47Q9H0S4 455 aaKnown RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 UBN1Q9NPG3 1134 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 ZSCAN5CA6NGD5 496 aaPredicted RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 EOMESO95936 686 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CAPN2P17655 700 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 DRG2P55039 364 aaKnown RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CDH8P55286 799 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 FAM189BP81408 668 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 MON1BQ7L1V2 547 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 C1orf131Q8NDD1 294 aaKnown RBP16.28■□□□□ 0.2
PPM1F-202ENST00000397495 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 CISHQ9NSE2 258 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 SLC38A7Q9NVC3 462 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
PPM1F-202ENST00000397495 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 FAM187AA6NFU0 413 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 PIRO00625 290 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
PPM1F-202ENST00000397495 CXCL10P02778 98 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 P4HA1P13674 534 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 GGCXP38435 758 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
PPM1F-202ENST00000397495 SLC1A1P43005 524 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 DHX34Q14147 1143 aaKnown RBP16.27■□□□□ 0.2
PPM1F-202ENST00000397495 MESDQ14696 234 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 CYP1B1Q16678 543 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 PTPROQ16827 1216 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
PPM1F-202ENST00000397495 KRT35Q92764 455 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 SDCBP2Q9H190 292 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.2
PPM1F-202ENST00000397495 GOLGA6L10A0A0M3HER8 536 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FAM170AA1A519 330 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 FGFR1P11362 822 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 ITGB8P26012 769 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 NOMO3P69849 1222 aa16.26■□□□□ 0.19
PPM1F-202ENST00000397495 TSEN2Q8NCE0 465 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms