RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ERMARDQ5T6L9 678 aa10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 EIF1ADQ8N9N8 165 aaKnown RBP10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 RNF169Q8NCN4 708 aa10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 BBOF1Q8ND07 529 aa10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 HPDLQ96IR7 371 aa10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 SEPT10Q9P0V9 454 aa10.99□□□□□ -0.65
CPSF1P1-201ENST00000397477 PSTPIP1O43586 416 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 PRPSAP2O60256 369 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 MAFO75444 373 aaPredicted RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 RBP3P10745 1247 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 DRD4P21917 467 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 PHKA2P46019 1235 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 OGDHQ02218 1023 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 GAD2Q05329 585 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SPRED3Q2MJR0 410 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 PTPN20Q4JDL3 420 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CATSPER4Q7RTX7 472 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 ACOT1Q86TX2 421 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 WDR49Q8IV35 697 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 EXD1Q8NHP7 514 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SPATA18Q8TC71 538 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SMARCAD1Q9H4L7 1026 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SLC40A1Q9NP59 571 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 ABCF3Q9NUQ8 709 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 FZD9O00144 591 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 MED7O43513 233 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 NUDT17P0C025 328 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 ADCYAP1R1P41586 468 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CTCFP49711 727 aaPredicted RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 ERFP50548 548 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 DRG2P55039 364 aaKnown RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SIX1Q15475 284 aaPredicted RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 HIF1AQ16665 826 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 ARHGEF18Q6ZSZ5 1173 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 KLHL29Q96CT2 875 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 PGM2Q96G03 612 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 EPB41L4BQ9H329 900 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 TRABDQ9H4I3 376 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CDH16O75309 829 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CYP1A1P04798 512 aaPredicted RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 P4HA1P13674 534 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 MMP8P22894 467 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SCTRP47872 440 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 IL9RQ01113 521 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CNGA2Q16280 664 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 TFDP3Q5H9I0 405 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 SH3PXD2AQ5TCZ1 1133 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 C3orf62Q6ZUJ4 267 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 LRRC8CQ8TDW0 803 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 OSBPL7Q9BZF2 842 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 C2orf40Q9H1Z8 148 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CDT1Q9H211 546 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 PIH1D1Q9NWS0 290 aaKnown RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 MRPL42Q9Y6G3 142 aaKnown RBP10.98□□□□□ -0.65
CPSF1P1-201ENST00000397477 CCT8L1PA6NM43 557 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 GPR25O00155 361 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 DNM1LO00429 736 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 LCP1P13796 627 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 DESP17661 470 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 HADHBP55084 474 aaKnown RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 PTK6Q13882 451 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 PKN2Q16513 984 aaKnown RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 RIOX2Q8IUF8 465 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 FAF2Q96CS3 445 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 GPR20Q99678 358 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 EIF4E1BA6NMX2 242 aaKnown RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 MSCO60682 206 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 NPTXRO95502 500 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 ABCD1P33897 745 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 MSH2P43246 934 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 OVGP1Q12889 678 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 EFTUD2Q15029 972 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 DPY19L2Q6NUT2 758 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 PDIK1LQ8N165 341 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 TTC17Q96AE7 1141 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 TWNKQ96RR1 684 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 TMEM191CA6NGB0 347 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 RTP1P59025 263 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 IFRD2Q12894 506 aaPredicted RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 MYO1EQ12965 1108 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 TMEM132DQ14C87 1099 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 SETDB1Q15047 1291 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 CELF3Q5SZQ8 465 aaKnown RBP10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 P3H4Q92791 437 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 TLCD1Q96CP7 247 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
CPSF1P1-201ENST00000397477 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms