RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 OXNAD1Q96HP4 312 aaPredicted RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 FRMD8P1Q9BZ68 369 aaPredicted RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 ASCC2Q9H1I8 757 aaPredicted RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 VCX3BQ9H321 246 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 VCX3AQ9NNX9 186 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 DDX56Q9NY93 547 aaKnown RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 SLC17A7Q9P2U7 560 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 SNCAIPQ9Y6H5 919 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 SMCHD1A6NHR9 2005 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 IQANK1A0A1B0GTG1 560 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 E7ESA3 106 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 PI4K2BG5E9Z4 385 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 DDX39AO00148 427 aaKnown RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 KLF11O14901 512 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 GH2P01242 217 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 SERPINB2P05120 415 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 LYNP07948 512 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 ETS1P14921 441 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 ATF7P17544 494 aaPredicted RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 PSMC4P43686 418 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 NEK3P51956 506 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 SH3BGRP55822 239 aaPredicted RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 LAMB3Q13751 1172 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 TFDP1Q14186 410 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 WDR72Q3MJ13 1102 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 MFSD7Q6UXD7 560 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 C15orf39Q6ZRI6 1047 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 PTF1AQ7RTS3 328 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 LRRC6Q86X45 466 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 TRIM42Q8IWZ5 723 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 TMEM161BQ8NDZ6 487 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 DTX3LQ8TDB6 740 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 CHURC1Q8WUH1 139 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 NCSTNQ92542 709 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 APOPT1Q96IL0 206 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 DEFB129Q9H1M3 183 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 GPAMQ9HCL2 828 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 METTL5Q9NRN9 209 aaKnown RBP9.79□□□□□ -0.84
UCA1-201ENST00000397381 ANKEF1Q9NU02 776 aa9.79□□□□□ -0.84
UCA1-201ENST00000397381 hCG_1818297A0A087WSY0 165 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 DENND3A2RUS2 1198 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 SGK1O00141 431 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 LPXNO60711 386 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 ATP5BP06576 529 aaKnown RBP9.78□□□□□ -0.84
UCA1-201ENST00000397381 ANPEPP15144 967 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 GARTP22102 1010 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 YWHABP31946 246 aaKnown RBP9.78□□□□□ -0.84
UCA1-201ENST00000397381 SERPINB4P48594 390 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 CDK18Q07002 472 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 ZFYVE27Q5T4F4 411 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 C3orf62Q6ZUJ4 267 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 ARHGAP22Q7Z5H3 698 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 MYLK4Q86YV6 388 aaPredicted RBP9.78□□□□□ -0.84
UCA1-201ENST00000397381 C4orf19Q8IY42 314 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 KBTBD2Q8IY47 623 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 GPD1LQ8N335 351 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 CENPKQ9BS16 269 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 PI4K2AQ9BTU6 479 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 FBXO6Q9NRD1 293 aaPredicted RBP9.78□□□□□ -0.84
UCA1-201ENST00000397381 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 KCNG1Q9UIX4 513 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 LY75O60449 1722 aa9.78□□□□□ -0.84
UCA1-201ENST00000397381 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.84
UCA1-201ENST00000397381 ITGB5P18084 799 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 SSTR1P30872 391 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 ETV4P43268 484 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 CACNB3P54284 484 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 AP2B1P63010 937 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 DSG1Q02413 1049 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 SLC18A2Q05940 514 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 DMP1Q13316 513 aaPredicted RBP9.77□□□□□ -0.84
UCA1-201ENST00000397381 EFTUD2Q15029 972 aaKnown RBP eCLIP9.77□□□□□ -0.84
UCA1-201ENST00000397381 TBCCQ15814 346 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 DNAL1Q4LDG9 190 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 C2CD6Q53TS8 623 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 BRDTQ58F21 947 aaPredicted RBP9.77□□□□□ -0.84
UCA1-201ENST00000397381 TFDP3Q5H9I0 405 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 FAM102BQ5T8I3 360 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 SDCCAG8Q86SQ7 713 aaPredicted RBP9.77□□□□□ -0.84
UCA1-201ENST00000397381 SCUBE1Q8IWY4 988 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 PALM2Q8IXS6 379 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 SLC35B2Q8TB61 432 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 POMGNT1Q8WZA1 660 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 PPP2R3CQ969Q6 453 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 OLFM3Q96PB7 478 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 CYTH2Q99418 400 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 ECSITQ9BQ95 431 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 KCNH7Q9NS40 1196 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 PCMTD2Q9NV79 361 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 WASF2Q9Y6W5 498 aa9.77□□□□□ -0.84
UCA1-201ENST00000397381 KLRG2A4D1S0 409 aaPredicted RBP9.77□□□□□ -0.85
UCA1-201ENST00000397381 TMEM191CA6NGB0 347 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 B2RBV5 119 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 G3V3G9 751 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 TM7SF2O76062 418 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 TMEM191BP0C7N4 346 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 MYL2P10916 166 aa9.77□□□□□ -0.85
UCA1-201ENST00000397381 ACO1P21399 889 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms