RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 INSRRP14616 1297 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 PTPN20Q4JDL3 420 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 LRRC34Q8IZ02 419 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 EMC1Q8N766 993 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 FDXACB1Q9BRP7 624 aaPredicted RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 TMEM109Q9BVC6 243 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 NINJ2Q9NZG7 142 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 HMGXB4Q9UGU5 601 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 PAPPA2Q9BXP8 1791 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 MCM3APO60318 1980 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 LACTBL1A8MY62 500 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 ITGB3P05106 788 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 MOGSQ13724 837 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 TTLL4Q14679 1199 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 FAM133BQ5BKY9 247 aaKnown RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 CYP4F22Q6NT55 531 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 RPAINQ86UA6 219 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 JOSD2Q8TAC2 188 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 ATXN2LQ8WWM7 1075 aaKnown RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 ARHGEF2Q92974 986 aaKnown RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 RBM41Q96IZ5 413 aaKnown RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 SIX4Q9UIU6 781 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 LIASO43766 372 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 ITGBL1O95965 494 aaPredicted RBP25.05■■□□□ 1.6
PABPN1-202ENST00000397276 VTNP04004 478 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 ZNF667Q5HYK9 610 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 SPOCD1Q6ZMY3 1216 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 CCDC125Q86Z20 511 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 C1orf127Q8N9H9 656 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 SDCBP2Q9H190 292 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 KDM4CQ9H3R0 1056 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 C10orf88Q9H8K7 445 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 AKT3Q9Y243 479 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 B4GALT4O60513 344 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 TJP3O95049 919 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 ATP6V1G2O95670 118 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 OSBPP22059 807 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 EIF4BP23588 611 aaKnown RBP25.05■■□□□ 1.6
PABPN1-202ENST00000397276 PPP1R2P3Q6NXS1 205 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 TAX1BP1Q86VP1 789 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 CCDC197Q8NCU1 140 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 TWNKQ96RR1 684 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 ELAC2Q9BQ52 826 aaKnown RBP25.05■■□□□ 1.6
PABPN1-202ENST00000397276 SMYD3Q9H7B4 428 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 IFT122Q9HBG6 1241 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 NOD2Q9HC29 1040 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 IFNB1P01574 187 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 PSMA2P25787 234 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 KLRC2P26717 231 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 JADE1Q6IE81 842 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 EXOC8Q8IYI6 725 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 SYNCQ9H7C4 482 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 PPME1Q9Y570 386 aa25.05■■□□□ 1.6
PABPN1-202ENST00000397276 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 STAG3L1P0CL83 205 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 EZRP15311 586 aaKnown RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ARSEP51690 589 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 CROCCP2Q86T23 111 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 TBC1D1Q86TI0 1168 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 PNMA8AQ86V59 439 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ROPN1BQ9BZX4 212 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ROPN1Q9HAT0 212 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 KCNK9Q9NPC2 374 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ERAP1Q9NZ08 941 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 A0A0G2JMZ2 1700 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 PIK3R2O00459 728 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 DNAJC8O75937 253 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ZNF286BP0CG31 522 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 KRT3P12035 628 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 PPP1R15BQ5SWA1 713 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 ARMCX2Q7L311 632 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 TAOK1Q7L7X3 1001 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 TMEM121Q9BTD3 319 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 STMN4Q9H169 189 aaPredicted RBP25.04■■□□□ 1.6
PABPN1-202ENST00000397276 KCNH4Q9UQ05 1017 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 L3MBTL1Q9Y468 752 aa25.04■■□□□ 1.6
PABPN1-202ENST00000397276 C22orf31O95567 290 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 PSMC1P62191 440 aaKnown RBP25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CAV1Q03135 178 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CAPN12Q6ZSI9 719 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 TAB3Q8N5C8 712 aaPredicted RBP25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CENPTQ96BT3 561 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 RBM15Q96T37 977 aaKnown RBP eCLIP25.03■■□□□ 1.61e-11■□□□□ 9.2
PABPN1-202ENST00000397276 ZNF518BQ9C0D4 1074 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 PCDHGC3Q9UN70 934 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 VIMP08670 466 aaKnown RBP25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CETPP11597 493 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 PAX7P23759 505 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 MKRN3Q13064 507 aaKnown RBP25.03■■□□□ 1.6
PABPN1-202ENST00000397276 GPS1Q13098 491 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 PPIL2Q13356 520 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 PIGHQ14442 188 aaPredicted RBP25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CYP4X1Q8N118 509 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 ANKRD42Q8N9B4 389 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 STAMBPL1Q96FJ0 436 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 CPXM1Q96SM3 734 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 TNFSF13BQ9Y275 285 aa25.03■■□□□ 1.6
PABPN1-202ENST00000397276 RAD23BP54727 409 aa25.02■■□□□ 1.6
PABPN1-202ENST00000397276 TNFAIP8L3Q5GJ75 292 aa25.02■■□□□ 1.6
PABPN1-202ENST00000397276 MFSD5Q6N075 450 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms