RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RPF1Q9H9Y2 349 aaKnown RBP9.49□□□□□ -0.89
CAPN3-208ENST00000397204 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
CAPN3-208ENST00000397204 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 ODF2LQ9ULJ1 636 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 NCANO14594 1321 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 USP24Q9UPU5 2620 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 A0A0B4J269 797 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 MTMR11A4FU01 709 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 PIRO00625 290 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 LCE2BO14633 110 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 FAM189A1O60320 539 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ATG13O75143 517 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 KRT37O76014 449 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 PIGRP01833 764 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ODC1P11926 461 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 CDC25CP30307 473 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 TNFSF9P41273 254 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 SOX9P48436 509 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 LIG4P49917 911 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ATP2C1P98194 919 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-208ENST00000397204 POU5F1Q01860 360 aaKnown RBP9.48□□□□□ -0.89
CAPN3-208ENST00000397204 DMWDQ09019 674 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 CCINQ13939 588 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 VEPH1Q14D04 833 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 TAF12Q16514 161 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ITPRIPL2Q3MIP1 535 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ARSHQ5FYA8 562 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 PPM1JQ5JR12 505 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 STXBP5Q5T5C0 1151 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ARL6IP4Q66PJ3 421 aaKnown RBP9.48□□□□□ -0.89
CAPN3-208ENST00000397204 TXNDC11Q6PKC3 985 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 CEP68Q76N32 757 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-208ENST00000397204 WDR5BQ86VZ2 330 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 THEM5Q8N1Q8 247 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 C2orf15Q8WU43 125 aaKnown RBP9.48□□□□□ -0.89
CAPN3-208ENST00000397204 TMEM209Q96SK2 561 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 ASB7Q9H672 318 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 GKN1Q9NS71 199 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 GTSE1Q9NYZ3 720 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 DSEQ9UL01 958 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 TBX20Q9UMR3 447 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 DERAQ9Y315 318 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 LAMA1P25391 3075 aa9.48□□□□□ -0.89
CAPN3-208ENST00000397204 NPHP3-ACAD11A0A0J9YXS1 232 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 HNRNPDLO14979 420 aaKnown RBP9.47□□□□□ -0.89
CAPN3-208ENST00000397204 NEFLP07196 543 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 ZNF806P0C7X5 589 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 LIMK1P53667 647 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 SKOR1P84550 965 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 AMPD2Q01433 879 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
CAPN3-208ENST00000397204 PON2Q15165 354 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 C9orf57Q5W0N0 161 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
CAPN3-208ENST00000397204 Q6ZS52 159 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 CACNA2D4Q7Z3S7 1137 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 METTL23Q86XA0 190 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 CMTM8Q8IZV2 173 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 MYCT1Q8N699 235 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 TTC8Q8TAM2 541 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 ZFYVE19Q96K21 471 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 AK8Q96MA6 479 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 PLIN2Q99541 437 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 MSTO1Q9BUK6 570 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 PPP4R2Q9NY27 417 aa9.47□□□□□ -0.89
CAPN3-208ENST00000397204 CPSF3Q9UKF6 684 aaKnown RBP9.47□□□□□ -0.89
CAPN3-208ENST00000397204 VWA3AA6NCI4 1184 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 PPEF2O14830 753 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 TM4SF5O14894 197 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 TRAK2O60296 914 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 SOAT2O75908 522 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 AKAP3O75969 853 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 DDX6P26196 483 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAPN3-208ENST00000397204 UBA7P41226 1012 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 RAP1GAPP47736 663 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 MCM2P49736 904 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 GUCY2FP51841 1108 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 ZNF131P52739 623 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 GTF2BQ00403 316 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 TNK2Q07912 1038 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 GRSF1Q12849 480 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM132DQ14C87 1099 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM119Q4V9L6 283 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 SLC39A12Q504Y0 691 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 MCTP1Q6DN14 999 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 IL31Q6EBC2 164 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 SLFN12LQ6IEE8 588 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms