RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 C9orf57Q5W0N0 161 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 NAIF1Q69YI7 327 aaPredicted RBP16.19■□□□□ 0.18
SEC13-206ENST00000397102 CYP2U1Q7Z449 544 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 CD302Q8IX05 232 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 CPA6Q8N4T0 437 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 ZCCHC14Q8WYQ9 949 aaKnown RBP16.19■□□□□ 0.18
SEC13-206ENST00000397102 EZH1Q92800 747 aaPredicted RBP16.19■□□□□ 0.18
SEC13-206ENST00000397102 CD101Q93033 1021 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 ECT2Q9H8V3 914 aa16.19■□□□□ 0.18
SEC13-206ENST00000397102 ASPMQ8IZT6 3477 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 PIRO00625 290 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 OGTO15294 1046 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 HMGA1P17096 107 aaKnown RBP16.18■□□□□ 0.18
SEC13-206ENST00000397102 LIG4P49917 911 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 CDR1P51861 262 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 NCKAP1LP55160 1127 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 MTF1Q14872 753 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 TXNDC8Q6A555 127 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 MON1AQ86VX9 555 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 METTL23Q86XA0 190 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 THEM5Q8N1Q8 247 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 TSTD1Q8NFU3 115 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 MRPS31Q92665 395 aaKnown RBP16.18■□□□□ 0.18
SEC13-206ENST00000397102 KCNN1Q92952 543 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
SEC13-206ENST00000397102 SPEGQ15772 3267 aa16.18■□□□□ 0.18
SEC13-206ENST00000397102 LAMA1P25391 3075 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 PTPRDP23468 1912 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 TNRC6BQ9UPQ9 1833 aaKnown RBP16.17■□□□□ 0.18
SEC13-206ENST00000397102 ASCC3Q8N3C0 2202 aaKnown RBP16.17■□□□□ 0.18
SEC13-206ENST00000397102 PKD1L2Q7Z442 2459 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 ANO9A1A5B4 782 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 PATE3B3GLJ2 98 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 CDC25AP30304 524 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 PSMD2Q13200 908 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
SEC13-206ENST00000397102 LRRTM3Q86VH5 581 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 RASSF3Q86WH2 238 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 DEFB124Q8NES8 71 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 OSCP1Q8WVF1 389 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 TPSD1Q9BZJ3 242 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 ABI2Q9NYB9 513 aaPredicted RBP16.17■□□□□ 0.18
SEC13-206ENST00000397102 KCND2Q9NZV8 630 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 LARSQ9P2J5 1176 aaKnown RBP16.17■□□□□ 0.18
SEC13-206ENST00000397102 LHX6Q9UPM6 363 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 INVSQ9Y283 1065 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 DERAQ9Y315 318 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 NEUROG3Q9Y4Z2 214 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
SEC13-206ENST00000397102 LAD1O00515 517 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 CYB561D2O14569 222 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 HNRNPDLO14979 420 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 PIGRP01833 764 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 NFICP08651 508 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 CSH1P0DML2 217 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 CSH2P0DML3 217 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 IRX4P78413 519 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 RING1Q06587 406 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 TMEM132DQ14C87 1099 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 UAP1L1Q3KQV9 507 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 DCP1BQ8IZD4 617 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 SYT2Q8N9I0 419 aaPredicted RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 FBXO18Q8NFZ0 1043 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 ATP2A3Q93084 1043 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 CNOT6LQ96LI5 555 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 CCSER1Q9C0I3 900 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 DUS2Q9NX74 493 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 EVLQ9UI08 416 aaPredicted RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 CPSF3Q9UKF6 684 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 MAGED2Q9UNF1 606 aaPredicted RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
SEC13-206ENST00000397102 FASNP49327 2511 aaKnown RBP16.16■□□□□ 0.18
SEC13-206ENST00000397102 HELZP42694 1942 aaKnown RBP16.15■□□□□ 0.18
SEC13-206ENST00000397102 BCKDHBP21953 392 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 SCP2P22307 547 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 PRPHP41219 470 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 IFNAR2P48551 515 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 TAF6P49848 677 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 LMAN2Q12907 356 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 USP4Q13107 963 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 ZNF77Q15935 545 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 IL17AQ16552 155 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 HYIQ5T013 277 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
SEC13-206ENST00000397102 SLC32A1Q9H598 525 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 UXTQ9UBK9 157 aaPredicted RBP16.15■□□□□ 0.18
SEC13-206ENST00000397102 MSRB2Q9Y3D2 182 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 PCDHB6Q9Y5E3 794 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
SEC13-206ENST00000397102 A0A0B4J269 797 aa16.14■□□□□ 0.17
SEC13-206ENST00000397102 HYAL3O43820 417 aaPredicted RBP16.14■□□□□ 0.17
SEC13-206ENST00000397102 TADA3O75528 432 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms