RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 PSMD6Q15008 389 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 SMTNL2Q2TAL5 461 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 SYCP2LQ5T4T6 812 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 APBB1IPQ7Z5R6 666 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 FAM160B2Q86V87 743 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 CCDC60Q8IWA6 550 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 UBR7Q8N806 425 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 NAT8LQ8N9F0 302 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 SENP7Q9BQF6 1050 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 EXOC7Q9UPT5 735 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 LIN7AO14910 233 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 PPP1R12AO14974 1030 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZC3H11AO75152 810 aaKnown RBP eCLIP14.66□□□□□ -0.06
NUP98-204ENST00000397004 PTPN4P29074 926 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 CDHR3Q6ZTQ4 885 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ENOSF1Q7L5Y1 443 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZFP69BQ9UJL9 534 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 SMG5Q9UPR3 1016 aaKnown RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 BPTFQ12830 3046 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 WDR64B1ANS9 1081 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ETV4P43268 484 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZNF132P52740 706 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 DYNLT1P63172 113 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 SP4Q02446 784 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 MORF4L2Q15014 288 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 TAF5Q15542 800 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 CYP4A22Q5TCH4 519 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ADGRD1Q6QNK2 874 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 TFAP2BQ92481 460 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZNF333Q96JL9 665 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 ZNF395Q9H8N7 513 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 PXMP2Q9NR77 195 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 CYTH4Q9UIA0 394 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 KPNB1Q14974 876 aaKnown RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 PAFAH2Q99487 392 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 PSMC3IPQ9P2W1 217 aaPredicted RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 SNCAIPQ9Y6H5 919 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 PSME4Q14997 1843 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 GSC2O15499 205 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 ZBED4O75132 1171 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 TBX10O75333 385 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 DCTN3O75935 186 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 DLDP09622 509 aaKnown RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 GARTP22102 1010 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 SERPINB3P29508 390 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 SESN3P58005 492 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 C11orf91Q3C1V1 193 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 ZNF394Q53GI3 561 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 RMDN3Q96TC7 470 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 MOV10L1Q9BXT6 1211 aaKnown RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 PLAC1Q9HBJ0 212 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 HEY2Q9UBP5 337 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 CFAP69A5D8W1 941 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 EXTL3O43909 919 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 C1QAP02745 245 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 HIRAP54198 1017 aaPredicted RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 GEMIN4P57678 1058 aaKnown RBP14.65□□□□□ -0.06
NUP98-204ENST00000397004 RAB6CQ53S08 254 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 SWSAP1Q6NVH7 229 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 C3orf62Q6ZUJ4 267 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 UNC45BQ8IWX7 931 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 RCOR2Q8IZ40 523 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 SKA1Q96BD8 255 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 RAB6CQ9H0N0 254 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 SLC38A10Q9HBR0 1119 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 TAS2R1Q9NYW7 299 aa14.65□□□□□ -0.06
NUP98-204ENST00000397004 A0A0G2JND7 137 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 SMAPO00193 183 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 FAM155BO75949 473 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 BRD2P25440 801 aaKnown RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 ERFP50548 548 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 DRG1Q9Y295 367 aaKnown RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 SGK1O00141 431 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 RAD17O75943 681 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ATP5HO75947 161 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ITGAVP06756 1048 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 RPL22P35268 128 aaKnown RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
NUP98-204ENST00000397004 TRAF1Q13077 416 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 WASHC2DQ5SRD0 308 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 FBXO36Q8NEA4 188 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 TRIM11Q96F44 468 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 GMLQ99445 158 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 PARVAQ9NVD7 372 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ARMCX1Q9P291 453 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 STYXL1Q9Y6J8 313 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms