RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 BSNDQ8WZ55 320 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 FAM136AQ96C01 138 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 WNK4Q96J92 1243 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 C11orf70Q9BRQ4 267 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 FAM167BQ9BTA0 163 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 TUBB6Q9BUF5 446 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 KIFC3Q9BVG8 833 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 PCDH9Q9HC56 1237 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 KMT5AQ9NQR1 393 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 HOXC10Q9NYD6 342 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 RABGEF1Q9UJ41 708 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.16
TRIM40-207ENST00000396581 CSADQ9Y600 493 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 RLFQ13129 1914 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 DPPA5A6NC42 116 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 TM9SF1O15321 606 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 DNAJC6O75061 913 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
TRIM40-207ENST00000396581 RTP1P59025 263 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 GPS1Q13098 491 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 PSMD6Q15008 389 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 MAPK6Q16659 721 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 XKR9Q5GH70 373 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 HHATQ5VTY9 493 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 FYB2Q5VWT5 728 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 ADGRD1Q6QNK2 874 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 TTC8Q8TAM2 541 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 KCNN1Q92952 543 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF333Q96JL9 665 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 VPS11Q9H270 941 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 SPATS2LQ9NUQ6 558 aaKnown RBP14.02□□□□□ -0.17
TRIM40-207ENST00000396581 PARVAQ9NVD7 372 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 ANKFY1Q9P2R3 1169 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF148Q9UQR1 794 aa14.02□□□□□ -0.17
TRIM40-207ENST00000396581 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
TRIM40-207ENST00000396581 CLUHO75153 1309 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 TCRBV5S1A1TA0A578 114 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 WDR64B1ANS9 1081 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 AHCYL1O43865 530 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 ENTPD5O75356 428 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 CFHP08603 1231 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 KRT10P13645 584 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 RPS6P62753 249 aaKnown RBP14.01□□□□□ -0.17
TRIM40-207ENST00000396581 TSNAXIP1Q2TAA8 658 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 MFSD7Q6UXD7 560 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 ANO5Q75V66 913 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 NLRX1Q86UT6 975 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 ZBED8Q8IZ13 594 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 RDM1Q8NG50 284 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-207ENST00000396581 DNAJC9Q8WXX5 260 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 ALKBH8Q96BT7 664 aaKnown RBP14.01□□□□□ -0.17
TRIM40-207ENST00000396581 CADM1Q9BY67 442 aaKnown RBP14.01□□□□□ -0.17
TRIM40-207ENST00000396581 VPS37BQ9H9H4 285 aa14.01□□□□□ -0.17
TRIM40-207ENST00000396581 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TMEM191CA6NGB0 347 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 CCDC22O60826 627 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 CCNE2O96020 404 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 IL1BP01584 269 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 HLA-DRAP01903 254 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TMEM191BP0C7N4 346 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
TRIM40-207ENST00000396581 ETS1P14921 441 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 KRT4P19013 534 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 ATP13A4Q4VNC1 1196 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 SPOCD1Q6ZMY3 1216 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TAS1R3Q7RTX0 852 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 APBB1IPQ7Z5R6 666 aaPredicted RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 PCGF5Q86SE9 256 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 MTDHQ86UE4 582 aaKnown RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 BANPQ8N9N5 519 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 CDCA5Q96FF9 252 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 PDLIM7Q9NR12 457 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 STOML1Q9UBI4 398 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 RIPK3Q9Y572 518 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 STYXL1Q9Y6J8 313 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 hCG_1818297A0A087WSY0 165 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 E7ESA3 106 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 EXTL3O43909 919 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TGDSO95455 350 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 TSHRP16473 764 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 MMP8P22894 467 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 PCK1P35558 622 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 KRT76Q01546 638 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 OCRLQ01968 901 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 ZNF252P-AS1Q0IIN9 211 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 PDIA2Q13087 525 aaKnown RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 CUL2Q13617 745 aa14□□□□□ -0.17
TRIM40-207ENST00000396581 KHDC1Q4VXA5 237 aaKnown RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 TDRD10Q5VZ19 366 aaKnown RBP14□□□□□ -0.17
TRIM40-207ENST00000396581 FAM91A1Q658Y4 838 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms