RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SIGLEC16A6NMB1 481 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TYROBPO43914 113 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CIB2O75838 187 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 GH2P01242 217 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 RPL7AP62424 266 aaKnown RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 PDCD2Q16342 344 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 HIF1AQ16665 826 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 ANKRD22Q5VYY1 191 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 FBXL13Q8NEE6 735 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 SLCO2A1Q92959 643 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CCDC124Q96CT7 223 aaKnown RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 NDNQ99608 321 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TMEM206Q9H813 350 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 SAR1AQ9NR31 198 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 EURLQ9NYK6 297 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 A6NJR5 290 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TNNI1P19237 187 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 MUTP22033 750 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 EPHB1P54762 984 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CENPCQ03188 943 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 DEUP1Q05D60 604 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 AP1B1Q10567 949 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 SMTNL2Q2TAL5 461 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CNPY1Q3B7I2 92 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 MSS51Q4VC12 460 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TXNRD3NBQ6F5E7 133 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 RBM41Q96IZ5 413 aaKnown RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TEKT3Q9BXF9 490 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-203ENST00000396547 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
TRIM39-203ENST00000396547 TTC36A6NLP5 189 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PROSCO94903 275 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 POLR2MP0CAP2 368 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PYGBP11216 843 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 KLRC2P26717 231 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ECE1P42892 770 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 SCNN1BP51168 640 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 GPX6P59796 221 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 YWHAGP61981 247 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 BASP1P80723 227 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 FNBP1LQ5T0N5 605 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 C6orf163Q5TEZ5 329 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 RIBC1Q8N443 379 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PYDC1Q8WXC3 89 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 DDX1Q92499 740 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 MKL1Q969V6 931 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ZC3H12CQ9C0D7 883 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ZWILCHQ9H900 591 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 AGTPBP1Q9UPW5 1226 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PAPPA2Q9BXP8 1791 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 GAKO14976 1311 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 FAM155BO75949 473 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 IL1R1P14778 569 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 GLRA2P23416 452 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 DSG3P32926 999 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 OCRLQ01968 901 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 XKR9Q5GH70 373 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 DCUN1D2Q6PH85 259 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 SIAH1Q8IUQ4 282 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ARID3BQ8IVW6 561 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 FBXO36Q8NEA4 188 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PTCD3Q96EY7 689 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 TTC25Q96NG3 672 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 HOMER2Q9NSB8 354 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 NDE1Q9NXR1 346 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 STX18Q9P2W9 335 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 PCDHB4Q9Y5E5 795 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 E5RJQ4 531 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 F8VP50 259 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 LIASO43766 372 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 VIL1P09327 827 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 HARSP12081 509 aaKnown RBP10.32□□□□□ -0.76
TRIM39-203ENST00000396547 ANPEPP15144 967 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 CIITAP33076 1130 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 CDK16Q00536 496 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 KCNT1Q5JUK3 1230 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 LPCAT4Q643R3 524 aa10.32□□□□□ -0.76
TRIM39-203ENST00000396547 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms