RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SEC24BO95487 1268 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 HMGA1P17096 107 aaKnown RBP18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 LONP1P36776 959 aaKnown RBP18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 ACOT2P49753 483 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 SLC39A4Q6P5W5 647 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 SYT13Q7L8C5 426 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 KBTBD6Q86V97 674 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 TMEM130Q8N3G9 435 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 CPA6Q8N4T0 437 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 ACDQ96AP0 544 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 TRMT2BQ96GJ1 504 aaKnown RBP18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 P2RY13Q9BPV8 354 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 HPS4Q9NQG7 708 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 EBF1Q9UH73 591 aa18.87■□□□□ 0.61
EXOSC3-202ENST00000396521 NR1H3Q13133 447 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 SF3A2Q15428 464 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 TMEM150AQ86TG1 271 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 LRRTM3Q86VH5 581 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 TMEM86AQ8N2M4 240 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 KRI1Q8N9T8 703 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 RASSF8Q8NHQ8 419 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 RAD54LQ92698 747 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 MYRFLQ96LU7 910 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 ACBD6Q9BR61 282 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 LSM14BQ9BX40 385 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 ZHX3Q9H4I2 956 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 TMEM206Q9H813 350 aa18.86■□□□□ 0.61
EXOSC3-202ENST00000396521 CHD6Q8TD26 2715 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 USP24Q9UPU5 2620 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 RNF40O75150 1001 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 PRPF40AO75400 957 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 APBB3O95704 486 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 MPLP40238 635 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 N4BP2L1Q5TBK1 243 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 FSIP1Q8NA03 581 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 LARP4BQ92615 738 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 ATP2A3Q93084 1043 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 FIZ1Q96SL8 496 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 SMG9Q9H0W8 520 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 BLOC1S4Q9NUP1 217 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 SEL1LQ9UBV2 794 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 EXOC7Q9UPT5 735 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 CEP295Q9C0D2 2601 aa18.85■□□□□ 0.61
EXOSC3-202ENST00000396521 NUP210Q8TEM1 1887 aaPredicted RBP18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 SDK1Q7Z5N4 2213 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 HUS1O60921 280 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 USP17L7P0C7H9 530 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 KCNA4P22459 653 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 DDIT3P35638 169 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 PDE6CP51160 858 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 GALK1P51570 392 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 MYL7Q01449 175 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 PLK5Q496M5 336 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 TXNDC8Q6A555 127 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 ZNF720Q7Z2F6 126 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 OSCP1Q8WVF1 389 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 POMGNT1Q8WZA1 660 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 CEP295NLQ96MC4 621 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 KIF2CQ99661 725 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 ECT2Q9H8V3 914 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 CCL26Q9Y258 94 aa18.84■□□□□ 0.61
EXOSC3-202ENST00000396521 OTOL1A6NHN0 477 aaPredicted RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 NOL4O94818 638 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 LDHAP00338 332 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 EGFP01133 1207 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 PFKLP17858 780 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 PLCG1P19174 1290 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 NMT1P30419 496 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 GJA4P35212 333 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 PXNP49023 591 aaPredicted RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 MTF1Q14872 753 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 RNF43Q68DV7 783 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 PKN3Q6P5Z2 889 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 LRRC52Q8N7C0 313 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 KIAA1958Q8N8K9 716 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 CD101Q93033 1021 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 FUBP3Q96I24 572 aaKnown RBP eCLIP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 DUS2Q9NX74 493 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 MAGED2Q9UNF1 606 aaPredicted RBP18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 RALGAPA1Q6GYQ0 2036 aa18.83■□□□□ 0.6
EXOSC3-202ENST00000396521 MYH11P35749 1972 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 TRAV19A0A0A6YYK7 116 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 KCNK5O95279 499 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 TCF3P15923 654 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 PCSK1P29120 753 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 LHX1P48742 406 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 MCM6Q14566 821 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 RABEP1Q15276 862 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 CFAP221Q4G0U5 840 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 DAB2IPQ5VWQ8 1189 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 BRAPQ7Z569 592 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 PI4K2AQ9BTU6 479 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms