RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SPDL1Q96EA4 605 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 SMC6Q96SB8 1091 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 YIPF3Q9GZM5 350 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 ELP3Q9H9T3 547 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 PHTF1Q9UMS5 762 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 CHMP2BQ9UQN3 213 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 DIS3Q9Y2L1 958 aaKnown RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 COQ4Q9Y3A0 265 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 NFASCO94856 1347 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 PSAPP07602 524 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CD48P09326 243 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 PAEPP09466 180 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 HSPA6P17066 643 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ANXA13P27216 316 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 PCK1P35558 622 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ATP11AP98196 1134 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 RCN2Q14257 317 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 SLC1A5Q15758 541 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 Q3C1V9 767 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 SCYL2Q6P3W7 929 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 LVRNQ6Q4G3 990 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 C15orf39Q6ZRI6 1047 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ARHGEF18Q6ZSZ5 1173 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CCDC89Q8N998 374 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 TTC8Q8TAM2 541 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 ARMCX1Q9P291 453 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 UVRAGQ9P2Y5 699 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MCM8Q9UJA3 840 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ARL2BPQ9Y2Y0 163 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 NR2E3Q9Y5X4 410 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CLGNO14967 610 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 FARP2O94887 1054 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 F7P08709 466 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 GZMAP12544 262 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ITIH2P19823 946 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 GPC3P51654 580 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 GDF10P55107 478 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ANKRD22Q5VYY1 191 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CGB2Q6NT52 195 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 DNAJC24Q6P3W2 148 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MTDHQ86UE4 582 aaKnown RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 TRAPPC12Q8WVT3 735 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 NLRP4Q96MN2 994 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 LRRC37BQ96QE4 947 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 PAGR1Q9BTK6 254 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 SHCBP1LQ9BZQ2 653 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ATP6V0A4Q9HBG4 840 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 NKX1-2Q9UD57 310 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ASAP2O43150 1006 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CDH16O75309 829 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ATG7O95352 703 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 SLC8A1P32418 973 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 GCKP35557 465 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 IL9RQ01113 521 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MAMLD1Q13495 774 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MOGSQ13724 837 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 TAF11Q15544 211 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 XRRA1Q6P2D8 792 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 TRMT10CQ7L0Y3 403 aaKnown RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 RHOT1Q8IXI2 618 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ANKRD35Q8N283 1001 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 FAM71DQ8N9W8 422 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 ATP6V0A1Q93050 837 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 CFAP36Q96G28 342 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 FBXO6Q9NRD1 293 aaPredicted RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 GRID1Q9ULK0 1009 aa9.78□□□□□ -0.84
NDE1-201ENST00000396354 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
NDE1-201ENST00000396354 ZBTB42B2RXF5 422 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 MAPK13O15264 365 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 DGAT1O75907 488 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 FAM155BO75949 473 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 MYL6P60660 151 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 YWHAGP61981 247 aaKnown RBP eCLIP9.77□□□□□ -0.84
NDE1-201ENST00000396354 EMC10Q5UCC4 262 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 GPAT2Q6NUI2 795 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 GADL1Q6ZQY3 521 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 RDM1Q8NG50 284 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 COPS5Q92905 334 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 PRR11Q96HE9 360 aaPredicted RBP9.77□□□□□ -0.84
NDE1-201ENST00000396354 SLC13A1Q9BZW2 595 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 LRRC19Q9H756 370 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 KIAA1586Q9HCI6 787 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 SLC12A4Q9UP95 1085 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 PCDHB2Q9Y5E7 798 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 HEY1Q9Y5J3 304 aa9.77□□□□□ -0.84
NDE1-201ENST00000396354 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 IGKV6D-21A0A0A0MT36 114 aa9.77□□□□□ -0.85
NDE1-201ENST00000396354 TCRBV7S3A2A0A539 114 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms