RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 CDH9Q9ULB4 789 aa14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 SLC27A5Q9Y2P5 690 aa14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 PCDHB5Q9Y5E4 795 aa14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 HELZP42694 1942 aaKnown RBP14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
HLA-DMA-202ENST00000395303 ZNF197O14709 1029 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 MOSPD3O75425 235 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ASS1P00966 412 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 HLA-DRAP01903 254 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ASGR2P07307 311 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 EPB41P11171 864 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ATF6P18850 670 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ACAT1P24752 427 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 LMO2P25791 158 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 CCR2P41597 374 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ALDH1A3P47895 512 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 EPHB3P54753 998 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 TNNC1P63316 161 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 HTR4Q13639 388 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 SGSM1Q2NKQ1 1148 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ZNF699Q32M78 642 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 CFAP221Q4G0U5 840 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 ZNF667Q5HYK9 610 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 IQCEQ6IPM2 695 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 TTI2Q6NXR4 508 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 POTEHQ6S545 545 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 TMC8Q8IU68 726 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 SUGP1Q8IWZ8 645 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 PSMG2Q969U7 264 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 CEP63Q96MT8 703 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 MMS19Q96T76 1030 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 CORO1BQ9BR76 489 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 TMEM8AQ9HCN3 771 aa14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
HLA-DMA-202ENST00000395303 HCRTO43612 131 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 TRIM49P0CI25 452 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 TRIM49CP0CI26 452 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 CEBPBP17676 345 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 MAGEA11P43364 429 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 TDGQ13569 410 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 MGAT5BQ3V5L5 792 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 FILIP1Q7Z7B0 1213 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 ITIH5Q86UX2 942 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 FAXDC2Q96IV6 333 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 PRRX2Q99811 253 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 CLSTN2Q9H4D0 955 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 ASAH2Q9NR71 780 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 GDE1Q9NZC3 331 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 GTF3C4Q9UKN8 822 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
HLA-DMA-202ENST00000395303 MIA3Q5JRA6 1907 aa14.27□□□□□ -0.12
HLA-DMA-202ENST00000395303 COL4A2P08572 1712 aa14.27□□□□□ -0.12
HLA-DMA-202ENST00000395303 BICDL2A1A5D9 508 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 MYBPHLA2RUH7 354 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 BIN1O00499 593 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 NRG2O14511 850 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 SOAT2O75908 522 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 PDGFBP01127 241 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 GNL1P36915 607 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 GCLMP48507 274 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 MAPRE1Q15691 268 aaKnown RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 CCDC142Q17RM4 750 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 KRT39Q6A163 491 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 MTSS1LQ765P7 747 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 PDZD4Q76G19 769 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 DNAJB7Q7Z6W7 309 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 NELFBQ8WX92 580 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 EEF2KMTQ96G04 330 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 GBP4Q96PP9 640 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 SEPT5Q99719 369 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 BCO2Q9BYV7 579 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 SDCBP2Q9H190 292 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 IL21Q9HBE4 155 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 COQ4Q9Y3A0 265 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.13
HLA-DMA-202ENST00000395303 F5P12259 2224 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 TICRRQ7Z2Z1 1910 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 STX10O60499 249 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 ATP2C2O75185 946 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 FGF19O95750 216 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 P4HA1P13674 534 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 AVPR2P30518 371 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 PIK3CAP42336 1068 aa14.26□□□□□ -0.13
HLA-DMA-202ENST00000395303 ASPAP45381 313 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms