RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 PEX2P28328 305 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 MAPKAPK2P49137 400 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 EIF6P56537 245 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ARL4CP56559 192 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 KRT85P78386 507 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CHIT1Q13231 466 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NCF4Q15080 339 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 MCMDC2Q4G0Z9 681 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ATL3Q6DD88 541 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PSTKQ8IV42 348 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ADAMTS15Q8TE58 950 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SYTL4Q96C24 671 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 C19orf60Q96EN9 201 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TESK2Q96S53 571 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CIB1Q99828 191 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 WNT8AQ9H1J5 351 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 DDX4Q9NQI0 724 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 UBA2Q9UBT2 640 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ANAPC5Q9UJX4 755 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SNX6Q9UNH7 406 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ROCK1Q13464 1354 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TROQ12816 1431 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8JA6NMD2 632 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8TH3BQL2 631 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ACKR2O00590 384 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TRIM38O00635 465 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 KRT86O43790 486 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8HP0CJ92 632 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GAAP10253 952 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NR2F1P10589 423 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CPB1P15086 417 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PAMP19021 973 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 RPA1P27694 616 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TRHRP34981 398 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ME1P48163 572 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CLCNKAP51800 687 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NCBP1Q09161 790 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 CSTF3Q12996 717 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SULT6B1Q6IMI4 303 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 INTS5Q6P9B9 1019 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 RABEPKQ7Z6M1 372 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NUDT13Q86X67 352 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TRMT44Q8IYL2 757 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 LPCAT1Q8NF37 534 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GATA6Q92908 595 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PDLIM5Q96HC4 596 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 NUP88Q99567 741 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 NUSAP1Q9BXS6 441 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 TRIM2Q9C040 744 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PREBQ9HCU5 417 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FOXD3Q9UJU5 478 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GMEB1Q9Y692 573 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 BZW2Q9Y6E2 419 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 ANKRD50Q9ULJ7 1429 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GSAPA4D1B5 854 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 RCCD1A6NED2 376 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CLDN3O15551 220 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 BEST1O76090 585 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 SCAF4O95104 1147 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 SLU7O95391 586 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 STAU1O95793 577 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 CST3P01034 146 aaPredicted RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 KRT14P02533 472 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 ARAFP10398 606 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PYGMP11217 842 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CPEP16870 476 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CHRM3P20309 590 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 MSH2P43246 934 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PMP22Q01453 160 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 DUSP4Q13115 394 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 LONRF2Q1L5Z9 754 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CES4AQ5XG92 561 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CYP4F22Q6NT55 531 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 NOTUMQ6P988 496 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PTCHD4Q6ZW05 846 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TLK2Q86UE8 772 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TRIM50Q86XT4 487 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 HDAC10Q969S8 669 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 NOC4LQ9BVI4 516 aaKnown RBP4.48□□□□□ -1.69
HERC4-204ENST00000395198 KCNH6Q9H252 994 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 MID1IP1Q9NPA3 183 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 KRT84Q9NSB2 600 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 VPS18Q9P253 973 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 RASAL2Q9UJF2 1139 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 DTNAQ9Y4J8 743 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PLB1Q6P1J6 1458 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CFAP43Q8NDM7 1665 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 CASKIN1Q8WXD9 1431 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 FAM205CA6NFA0 338 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 TMEM232C9JQI7 657 aa4.48□□□□□ -1.69
HERC4-204ENST00000395198 PITPNM1O00562 1244 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms