RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PPP2R2AP63151 447 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 GAD2Q05329 585 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CCNG2Q16589 344 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 SLC10A6Q3KNW5 377 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 IER5Q5VY09 327 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 DENND1BQ6P3S1 775 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CCDC26Q8TAB7 109 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 MDM1Q8TC05 714 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 DENND1AQ8TEH3 1009 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 FAM81BQ96LP2 452 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 ADAMTS10Q9H324 1103 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 L3MBTL1Q9Y468 752 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 H0YCG3 227 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 DKC1O60832 514 aaKnown RBP eCLIP10.84□□□□□ -0.67
HIF1A-203ENST00000394997 LSM8O95777 96 aaKnown RBP10.84□□□□□ -0.67
HIF1A-203ENST00000394997 GNA15P30679 374 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 POLE2P56282 527 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CLUL1Q15846 466 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 SLFN12LQ6IEE8 588 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
HIF1A-203ENST00000394997 LMNTD2Q8IXW0 634 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 LRRC71Q8N4P6 559 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 MCRS1Q96EZ8 462 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
HIF1A-203ENST00000394997 DNM1LO00429 736 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 OGTO15294 1046 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 ERBB2P04626 1255 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 NFICP08651 508 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 FGFR4P22455 802 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 GDF10P55107 478 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 KRT17Q04695 432 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 MGAT5Q09328 741 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 ALLCQ8N6M5 410 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 SHCBP1Q8NEM2 672 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 IFT74Q96LB3 600 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CPXM1Q96SM3 734 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 RAB17Q9H0T7 212 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 CTNNAL1Q9UBT7 734 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 IVNS1ABPQ9Y6Y0 642 aa10.84□□□□□ -0.67
HIF1A-203ENST00000394997 PPP1R12AO14974 1030 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 CILPO75339 1184 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 LRCH4O75427 683 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 GPD2P43304 727 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 LIG4P49917 911 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 CNGA2Q16280 664 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 RNASEH2BQ5TBB1 312 aaKnown RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 CCT6BQ92526 530 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 NKD2Q969F2 451 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 UBN1Q9NPG3 1134 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 NINJ2Q9NZG7 142 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 E7ESA3 106 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 K7ERI5 159 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 GPR32O75388 356 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 FSBPO95073 299 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PSMC4P43686 418 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 LACTB2Q53H82 288 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 XKR4Q5GH76 650 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 DENND2CQ68D51 928 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 TMEM270Q6UE05 265 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 TRIM72Q6ZMU5 477 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PHLDB2Q86SQ0 1253 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 FEZF2Q8TBJ5 459 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 SEC16BQ96JE7 1060 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 CLUHO75153 1309 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 GAS2O43903 313 aaKnown RBP10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PIK3CAP42336 1068 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PLTPP55058 493 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 GPX6P59796 221 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 MFSD7Q6UXD7 560 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 HOOK3Q86VS8 718 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 UBL4BQ8N7F7 174 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 PTPN18Q99952 460 aa10.83□□□□□ -0.68
HIF1A-203ENST00000394997 CD48P09326 243 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 TBXAS1P24557 533 aaPredicted RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 SP4Q02446 784 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 FASTKD3Q14CZ7 662 aaKnown RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 GALNTL6Q49A17 601 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 MSS51Q4VC12 460 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 OTUD1Q5VV17 481 aaPredicted RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 STAMBPL1Q96FJ0 436 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 ZMAT2Q96NC0 199 aaKnown RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 NAP1L3Q99457 506 aaPredicted RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 NOP53Q9NZM5 478 aaKnown RBP10.82□□□□□ -0.68
HIF1A-203ENST00000394997 MORF4L1Q9UBU8 362 aa10.82□□□□□ -0.68
HIF1A-203ENST00000394997 DNPEPQ9ULA0 475 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms