RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MAGED2Q9UNF1 606 aaPredicted RBP22.79■■□□□ 1.24
TRAF4-203ENST00000394925 PCDHB5Q9Y5E4 795 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 EML5Q05BV3 1969 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 LAMA1P25391 3075 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 CFAP47Q6ZTR5 3102 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 OBSL1O75147 1896 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 RNF40O75150 1001 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 EGFP01133 1207 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 ARSAP15289 507 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 ABCD1P33897 745 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 GPR15P49685 360 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 KARSQ15046 597 aaKnown RBP22.78■■□□□ 1.24
TRAF4-203ENST00000394925 N4BP2L1Q5TBK1 243 aaPredicted RBP22.78■■□□□ 1.24
TRAF4-203ENST00000394925 SLFN12LQ6IEE8 588 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 RIN3Q8TB24 985 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 RAD54LQ92698 747 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 PI4K2AQ9BTU6 479 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 CCSER1Q9C0I3 900 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 SMOC1Q9H4F8 434 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 FBRSL1Q9HCM7 1045 aaKnown RBP22.78■■□□□ 1.24
TRAF4-203ENST00000394925 TMLHEQ9NVH6 421 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 CHD6Q8TD26 2715 aa22.78■■□□□ 1.24
TRAF4-203ENST00000394925 KPNA7A9QM74 516 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 TULP1O00294 542 aaPredicted RBP22.77■■□□□ 1.24
TRAF4-203ENST00000394925 DDX6P26196 483 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRAF4-203ENST00000394925 AMPD2Q01433 879 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 SV2CQ496J9 727 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 SDHAF4Q5VUM1 108 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 CC2D1AQ6P1N0 951 aaPredicted RBP22.77■■□□□ 1.24
TRAF4-203ENST00000394925 EFCAB13Q8IY85 973 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 MRPS31Q92665 395 aaKnown RBP22.77■■□□□ 1.24
TRAF4-203ENST00000394925 IKZF4Q9H2S9 585 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 KIF9Q9HAQ2 790 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 STYXL1Q9Y6J8 313 aa22.77■■□□□ 1.24
TRAF4-203ENST00000394925 CEP295Q9C0D2 2601 aa22.77■■□□□ 1.23
TRAF4-203ENST00000394925 TM4SF5O14894 197 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 PRPF40AO75400 957 aaKnown RBP22.76■■□□□ 1.23
TRAF4-203ENST00000394925 CSH1P0DML2 217 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 CSH2P0DML3 217 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 GJB2P29033 226 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 GALK1P51570 392 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 TSPY1Q01534 308 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 GRIN1Q05586 938 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 STPG1Q5TH74 334 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 NAIF1Q69YI7 327 aaPredicted RBP22.76■■□□□ 1.23
TRAF4-203ENST00000394925 CRELD2Q6UXH1 353 aaPredicted RBP22.76■■□□□ 1.23
TRAF4-203ENST00000394925 MON1AQ86VX9 555 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 HHIPQ96QV1 700 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 ANGPTL2Q9UKU9 493 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 ZFHX4Q86UP3 3567 aa22.76■■□□□ 1.23
TRAF4-203ENST00000394925 AKAP3O75969 853 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 PLA2G2CQ5R387 149 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 CAMKK1Q8N5S9 505 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 TTC16Q8NEE8 873 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 POMGNT1Q8WZA1 660 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
TRAF4-203ENST00000394925 ZNF560Q96MR9 790 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 PCDHGA5Q9Y5G8 931 aa22.75■■□□□ 1.23
TRAF4-203ENST00000394925 DRD1P21728 446 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 PMLP29590 882 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 MPLP40238 635 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 PDGFRLQ15198 375 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 DDR2Q16832 855 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 ZC3H10Q96K80 434 aaKnown RBP22.74■■□□□ 1.23
TRAF4-203ENST00000394925 P2RY13Q9BPV8 354 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 ST6GALNAC4Q9H4F1 302 aa22.74■■□□□ 1.23
TRAF4-203ENST00000394925 SOBPA7XYQ1 873 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 IL18RAPO95256 599 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 ADSSP30520 456 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 GJA4P35212 333 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 LONP1P36776 959 aaKnown RBP22.73■■□□□ 1.23
TRAF4-203ENST00000394925 POU5F1Q01860 360 aaKnown RBP22.73■■□□□ 1.23
TRAF4-203ENST00000394925 ZNF268Q14587 947 aaPredicted RBP22.73■■□□□ 1.23
TRAF4-203ENST00000394925 MTF1Q14872 753 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 NFE2Q16621 373 aaPredicted RBP22.73■■□□□ 1.23
TRAF4-203ENST00000394925 PLK5Q496M5 336 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 PDCL2Q8N4E4 241 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 KRI1Q8N9T8 703 aaKnown RBP22.73■■□□□ 1.23
TRAF4-203ENST00000394925 RPLP0P6Q8NHW5 317 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 TRPC7Q9HCX4 862 aa22.73■■□□□ 1.23
TRAF4-203ENST00000394925 TADA3O75528 432 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 ACAT1P24752 427 aaKnown RBP22.72■■□□□ 1.23
TRAF4-203ENST00000394925 CYP2F1P24903 491 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 POLR2BP30876 1174 aaKnown RBP22.72■■□□□ 1.23
TRAF4-203ENST00000394925 PNPLA4P41247 253 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 RPL10AP62906 217 aaKnown RBP22.72■■□□□ 1.23
TRAF4-203ENST00000394925 TFAMQ00059 246 aaKnown RBP22.72■■□□□ 1.23
TRAF4-203ENST00000394925 POSTNQ15063 836 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 FBXO43Q4G163 708 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 DYMQ7RTS9 669 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 ZNF720Q7Z2F6 126 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 SFR1Q86XK3 245 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 NT5DC4Q86YG4 428 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 CPA6Q8N4T0 437 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 EXOC4Q96A65 974 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 TMX3Q96JJ7 454 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 CYP2S1Q96SQ9 504 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 DUSP15Q9H1R2 295 aaPredicted RBP22.72■■□□□ 1.23
TRAF4-203ENST00000394925 ECT2Q9H8V3 914 aa22.72■■□□□ 1.23
TRAF4-203ENST00000394925 VPS45Q9NRW7 570 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms