RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PAPD7Q5XG87 772 aaKnown RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 RNF180Q86T96 592 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CTAGE6Q86UF2 777 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 SERINC5Q86VE9 423 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 FAM228AQ86W67 206 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CTAGE4Q8IX94 777 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 PCSK9Q8NBP7 692 aaKnown RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 SLC35G2Q8TBE7 412 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CTNNBL1Q8WYA6 563 aaPredicted RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 CAPZA3Q96KX2 299 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 OSBPL7Q9BZF2 842 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 CISHQ9NSE2 258 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 PACSIN2Q9UNF0 486 aaPredicted RBP7.39□□□□□ -1.23
RTN4-205ENST00000394609 AGAP1Q9UPQ3 857 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 GPSM3Q9Y4H4 160 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 PCDHB2Q9Y5E7 798 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 KAT6AQ92794 2004 aa7.39□□□□□ -1.23
RTN4-205ENST00000394609 ANKRD62A6NC57 917 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 BTNL10A8MVZ5 291 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 M0QZ92 97 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 RTN2O75298 545 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 RECQL4O94761 1208 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 GNA15P30679 374 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ASPAP45381 313 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 YARSP54577 528 aaKnown RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 ITGA7Q13683 1181 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 PCBP1Q15365 356 aaKnown RBP eCLIP7.38□□□□□ -1.23
RTN4-205ENST00000394609 C2CD6Q53TS8 623 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 UBXN11Q5T124 520 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TWF2Q6IBS0 349 aaKnown RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 PHLDB2Q86SQ0 1253 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 RSPH3Q86UC2 560 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 PASD1Q8IV76 773 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CXorf38Q8TB03 319 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SH3TC2Q8TF17 1288 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 COG1Q8WTW3 980 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 C18orf25Q96B23 403 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 HPDLQ96IR7 371 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TLR10Q9BXR5 811 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ISCUQ9H1K1 167 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 INTUQ9ULD6 942 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SNX12Q9UMY4 172 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ST3GAL5Q9UNP4 418 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 COG5Q9UP83 839 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 NOD1Q9Y239 953 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 FAN1Q9Y2M0 1017 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 HYOU1Q9Y4L1 999 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TRIM17Q9Y577 477 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 PCDHGC5Q9Y5F6 944 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SRRM3A6NNA2 597 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 THAP12O43422 761 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 GNRH1P01148 92 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 IBSPP21815 317 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 CST5P28325 142 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 AXLP30530 894 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 GRK4P32298 578 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 BPIFB4P59827 614 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 GPC5P78333 572 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 POU5F1Q01860 360 aaKnown RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 ORC1Q13415 861 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CLEC16AQ2KHT3 1053 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ZNF667Q5HYK9 610 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 NAA35Q5VZE5 725 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 LRRC57Q8N9N7 239 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 ARRDC4Q8NCT1 418 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 RFFLQ8WZ73 363 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CYFIP2Q96F07 1278 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SNX27Q96L92 541 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CNTNAP3BQ96NU0 1288 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CNTNAP3Q9BZ76 1288 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 EPC1Q9H2F5 836 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SMYD3Q9H7B4 428 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 AGO3Q9H9G7 860 aaKnown RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 PLEKHA5Q9HAU0 1116 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 HMX1Q9NP08 348 aaPredicted RBP7.38□□□□□ -1.23
RTN4-205ENST00000394609 ABCB6Q9NP58 842 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 DONSONQ9NYP3 566 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 SMARCAL1Q9NZC9 954 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TUBGCP4Q9UGJ1 667 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 CNTN6Q9UQ52 1028 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 C2CD2Q9Y426 696 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 TRPV2Q9Y5S1 764 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 PTCH2Q9Y6C5 1203 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 MGAMO43451 1857 aa7.38□□□□□ -1.23
RTN4-205ENST00000394609 A0A0A6YYK5 440 aaPredicted RBP7.37□□□□□ -1.23
RTN4-205ENST00000394609 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
RTN4-205ENST00000394609 PPEF2O14830 753 aa7.37□□□□□ -1.23
RTN4-205ENST00000394609 BUB1BO60566 1050 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms