RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 ZKSCAN8Q15776 578 aaPredicted RBP17.55■□□□□ 0.4
PRDM5-202ENST00000394435 CYB5D1Q6P9G0 228 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 CEP128Q6ZU80 1094 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 MAML1Q92585 1016 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 COPS5Q92905 334 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 FGD4Q96M96 766 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 NKIRAS1Q9NYS0 192 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 PPME1Q9Y570 386 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 CSADQ9Y600 493 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 C3orf70A6NLC5 250 aaPredicted RBP17.55■□□□□ 0.4
PRDM5-202ENST00000394435 RASA4BC9J798 803 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 POC1B-GALNT4F8VUJ3 575 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 ACKR2O00590 384 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 RASA4O43374 803 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 CXCL8P10145 99 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 XRCC4Q13426 336 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 KCNT1Q5JUK3 1230 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 ARFGAP1Q8N6T3 406 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 SPATA33Q96N06 139 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 TGS1Q96RS0 853 aaKnown RBP17.55■□□□□ 0.4
PRDM5-202ENST00000394435 SLC12A4Q9UP95 1085 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 AGTPBP1Q9UPW5 1226 aa17.55■□□□□ 0.4
PRDM5-202ENST00000394435 GAS2O43903 313 aaKnown RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 KRT3P12035 628 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 IL1R2P27930 398 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 CLCN3P51790 818 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 YWHAEP62258 255 aaKnown RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 RNASEH2BQ5TBB1 312 aaKnown RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 NKD2Q969F2 451 aaPredicted RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 SDCBP2Q9H190 292 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 FZD8Q9H461 694 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 MINDY3Q9H8M7 445 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 ELP3Q9H9T3 547 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 STRIP2Q9ULQ0 834 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 ANK1P16157 1881 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 IRF6O14896 467 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 B4GALT4O60513 344 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 ITGAVP06756 1048 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 PSMC1P62191 440 aaKnown RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 ARHGEF18Q6ZSZ5 1173 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 PLPPR4Q7Z2D5 763 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 FBXO16Q8IX29 292 aaPredicted RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 DHX37Q8IY37 1157 aaKnown RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 KIAA0319LQ8IZA0 1049 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 EMC1Q8N766 993 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 ASCC2Q9H1I8 757 aaPredicted RBP17.54■□□□□ 0.4
PRDM5-202ENST00000394435 CDT1Q9H211 546 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 VPS37BQ9H9H4 285 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 CD248Q9HCU0 757 aa17.54■□□□□ 0.4
PRDM5-202ENST00000394435 SIGLEC16A6NMB1 481 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 GOLGA8MH3BSY2 632 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 SPAG7O75391 227 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 LRCH4O75427 683 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 BANF1O75531 89 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 SLC25A11Q02978 314 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 MORF4L2Q15014 288 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 EFCAB12Q6NXP0 572 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 ZBED8Q8IZ13 594 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 SLC35B2Q8TB61 432 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 SIX4Q9UIU6 781 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 ACTL7BQ9Y614 415 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 ADM5C9JUS6 153 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 UBOX5O94941 541 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 GSTA1P08263 222 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 NFICP08651 508 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 POLR2BP30876 1174 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 RAD23BP54727 409 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 TFDP1Q14186 410 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 ZNF667Q5HYK9 610 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 PARP9Q8IXQ6 854 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 GPC2Q8N158 579 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 SGSM3Q96HU1 749 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 TTC25Q96NG3 672 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 CPXM1Q96SM3 734 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 PAIP2Q9BPZ3 127 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 PCDH9Q9HC56 1237 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 TXNRD2Q9NNW7 524 aa17.53■□□□□ 0.4
PRDM5-202ENST00000394435 METTL5Q9NRN9 209 aaKnown RBP17.53■□□□□ 0.4
PRDM5-202ENST00000394435 UTRNP46939 3433 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 CSDE1O75534 798 aaKnown RBP17.52■□□□□ 0.4
PRDM5-202ENST00000394435 SUN1O94901 812 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 FOXN2P32314 431 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 OTUD4Q01804 1114 aaKnown RBP17.52■□□□□ 0.4
PRDM5-202ENST00000394435 MBTD1Q05BQ5 628 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 PDIA2Q13087 525 aaKnown RBP17.52■□□□□ 0.4
PRDM5-202ENST00000394435 CCDC142Q17RM4 750 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 Q3C1V9 767 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 SPATA21Q7Z572 469 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 POLNQ7Z5Q5 900 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 ANKMY2Q8IV38 441 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 EXOC8Q8IYI6 725 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 RIBC1Q8N443 379 aaPredicted RBP17.52■□□□□ 0.4
PRDM5-202ENST00000394435 ACTL9Q8TC94 416 aa17.52■□□□□ 0.4
PRDM5-202ENST00000394435 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms