RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 GJC2Q5T442 439 aaPredicted RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 CDCA2Q69YH5 1023 aaPredicted RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 HIBCHQ6NVY1 386 aaPredicted RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 MPZL3Q6UWV2 235 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 PARP9Q8IXQ6 854 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 EMC1Q8N766 993 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 JOSD2Q8TAC2 188 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 CYTH4Q9UIA0 394 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 CNMDO75829 334 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 TNNC2P02585 160 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 GHRP10912 638 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 MTM1Q13496 603 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 PTPN20Q4JDL3 420 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 FAM182AQ5T1J6 154 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 FGD4Q96M96 766 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 TPX2Q9ULW0 747 aaKnown RBP20.62■□□□□ 0.89
RCCD1-201ENST00000394258 SIP14410 1827 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 PAX7P23759 505 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 XRCC4Q13426 336 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 SGSM3Q96HU1 749 aa20.62■□□□□ 0.89
RCCD1-201ENST00000394258 SGK1O00141 431 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 UBOX5O94941 541 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 LSM8O95777 96 aaKnown RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 PSMA2P25787 234 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TMED2Q15363 201 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SULF1Q8IWU6 871 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 BBOF1Q8ND07 529 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 ANKRD36BP1Q96IX9 119 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 RNPEPQ9H4A4 650 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 NFICP08651 508 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TXNP10599 105 aaKnown RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 PECAM1P16284 738 aaPredicted RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TFDP3Q5H9I0 405 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SYNCQ9H7C4 482 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 PCSK1NQ9UHG2 260 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SLC12A4Q9UP95 1085 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 AGTPBP1Q9UPW5 1226 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 hCG_1818297A0A087WSY0 165 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 ACKR2O00590 384 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SPAG7O75391 227 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 BANF1O75531 89 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 DNAJC8O75937 253 aaPredicted RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 KRT3P12035 628 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SNCBQ16143 134 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TSHZ1Q6ZSZ6 1077 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TBC1D1Q86TI0 1168 aaPredicted RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 MIEF2Q96C03 454 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 DCPSQ96C86 337 aaKnown RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 TBC1D31Q96DN5 1066 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 NSRP1Q9H0G5 558 aaKnown RBP20.61■□□□□ 0.89
RCCD1-201ENST00000394258 SLC24A3Q9HC58 644 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 HMGXB4Q9UGU5 601 aa20.61■□□□□ 0.89
RCCD1-201ENST00000394258 PTPRFP10586 1907 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 POC1B-GALNT4F8VUJ3 575 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PIK3R2O00459 728 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 OAS1P00973 400 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 EIF4BP23588 611 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 CDKN2BP42772 138 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PIGHQ14442 188 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PPP1R15BQ5SWA1 713 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PPP1R2P3Q6NXS1 205 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 RPAINQ86UA6 219 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 ZCCHC9Q8N567 271 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 ALLCQ8N6M5 410 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 CKAP2Q8WWK9 683 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PAIP2Q9BPZ3 127 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 MAF1Q9H063 256 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 CDT1Q9H211 546 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 KIF9Q9HAQ2 790 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PTPRHQ9HD43 1115 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 RBPJLQ9UBG7 517 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 IGKV6-21A0A0C4DH24 114 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 GPR25O00155 361 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 SKAP2O75563 359 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 IL1R2P27930 398 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 ATP5DP30049 168 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 PSMC1P62191 440 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 ELF3P78545 371 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 LMNB2Q03252 620 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 GRM1Q13255 1194 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 KCTD2Q14681 263 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 EAPPQ56P03 285 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 P3H4Q92791 437 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 THOC1Q96FV9 657 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 TWNKQ96RR1 684 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 CPXM1Q96SM3 734 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 SMYD3Q9H7B4 428 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 RPF1Q9H9Y2 349 aaKnown RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 SIX4Q9UIU6 781 aa20.6■□□□□ 0.89
RCCD1-201ENST00000394258 USP15Q9Y4E8 981 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-201ENST00000394258 DNALI1O14645 258 aaPredicted RBP20.59■□□□□ 0.89
RCCD1-201ENST00000394258 PIAS1O75925 651 aa20.59■□□□□ 0.89
RCCD1-201ENST00000394258 CGB2Q6NT52 195 aa20.59■□□□□ 0.89
RCCD1-201ENST00000394258 ARFGAP1Q8N6T3 406 aa20.59■□□□□ 0.89
RCCD1-201ENST00000394258 TGS1Q96RS0 853 aaKnown RBP20.59■□□□□ 0.89
RCCD1-201ENST00000394258 CCDC77Q9BR77 488 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms