RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 RCOR2Q8IZ40 523 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 CENPIQ92674 756 aaPredicted RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 TNIP3Q96KP6 325 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 SNX13Q9Y5W8 968 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 CRKP46108 304 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ABATP80404 500 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 Q3C1V9 767 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 IFNL3Q8IZI9 196 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 KIF2BQ8N4N8 673 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 MYRFQ9Y2G1 1151 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 MMP1P03956 469 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 LRRC17Q8N6Y2 441 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 DISP3Q9P2K9 1392 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 THRAP10827 490 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 CAMK1Q14012 370 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ATPAF2Q8N5M1 289 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 PCDHGA4Q9Y5G9 962 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ARHGEF33A8MVX0 844 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ITIH2P19823 946 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 NT5C2P49902 561 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 BICRALQ6AI39 1079 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 LINC00523Q86TU6 105 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 MCPH1Q8NEM0 835 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 NUP160Q12769 1436 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 TMEM120BA0PK00 339 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 PHF2O75151 1096 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ANXA6P08133 673 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ALOX15P16050 662 aaPredicted RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 PSMB9P28065 219 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 AP3B2Q13367 1082 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 LRRC6Q86X45 466 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 CDK20Q8IZL9 346 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 RACGAP1Q9H0H5 632 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 KATNA1O75449 491 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 GTF2E2P29084 291 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 ARPP19P56211 112 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 NLRP10Q86W26 655 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 PIGOQ8TEQ8 1089 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 ADCY6O43306 1168 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ERN1O75460 977 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 TPI1P60174 286 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 BST2Q10589 180 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 BNC2Q6ZN30 1099 aaPredicted RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 CMTR1Q8N1G2 835 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 ARL10Q8N8L6 244 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 NEK6Q9HC98 313 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 ARAP1Q96P48 1450 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 DDI2Q5TDH0 399 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 TTC23Q5W5X9 447 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ZBTB49Q6ZSB9 765 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 MMGT1Q8N4V1 131 aa13.92□□□□□ -0.18
USP49-203ENST00000394253 ZC3H10Q96K80 434 aaKnown RBP13.92□□□□□ -0.18
USP49-203ENST00000394253 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 NQO1P15559 274 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 MDM4O15151 490 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 MGRN1O60291 552 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 KHDRBS3O75525 346 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 OCLNQ16625 522 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 FAM98BQ52LJ0 330 aaKnown RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 AGAP9Q5VTM2 703 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 TTC27Q6P3X3 843 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 LPIN1Q14693 890 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 FAM102AQ5T9C2 384 aaPredicted RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 FNIP1Q8TF40 1166 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 ZNF222Q9UK12 451 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 ZBTB7BO15156 539 aaPredicted RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 HK2P52789 917 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 AMER2Q8N7J2 671 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 MTSS1O43312 755 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 CDH3P22223 829 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 NME3Q13232 169 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 LRRC71Q8N4P6 559 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 CHMP1AQ9HD42 196 aaPredicted RBP13.91□□□□□ -0.18
USP49-203ENST00000394253 SORBS3O60504 671 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 ZNF806P0C7X5 589 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 RALAP11233 206 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 ATF6P18850 670 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 CCNCP24863 283 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 GTF2H1P32780 548 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 PDXDC2PQ6P474 469 aa13.91□□□□□ -0.18
USP49-203ENST00000394253 ZNF438Q7Z4V0 828 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms