RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ANGEL2Q5VTE6 544 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 KLHL10Q6JEL2 608 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 KRT80Q6KB66 452 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 TMEM154Q6P9G4 183 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 LAYNQ6UX15 382 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 LPCAT2Q7L5N7 544 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 MANSC1Q9H8J5 431 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 UNKLQ9H9P5 680 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 IL1RAPL2Q9NP60 686 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 MTO1Q9Y2Z2 717 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 PCDHGA1Q9Y5H4 931 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 CFAP20Q9Y6A4 193 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 TRBV23OR9-2A0A075B6M9 112 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 NEURL1BA8MQ27 555 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 IKBKBO14920 756 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 FRS3O43559 492 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 PLA2G6O60733 806 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 ERAL1O75616 437 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 SNRPA1P09661 255 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 MSL3P1P0C860 447 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 MC4RP32245 332 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 LIMK1P53667 647 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 ROM1Q03395 351 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 BFSP1Q12934 665 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 DEPDC1Q5TB30 811 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 CPOQ8IVL8 374 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 MRPL41Q8IXM3 137 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 SSH1Q8WYL5 1049 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 RFFLQ8WZ73 363 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 ISL2Q96A47 359 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 TTC25Q96NG3 672 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 ZMAT4Q9H898 229 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 SEC63Q9UGP8 760 aaKnown RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 ZMYND8Q9ULU4 1186 aaPredicted RBP3.8□□□□□ -1.8
XRN1-202ENST00000392981 DERAQ9Y315 318 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 TRPV2Q9Y5S1 764 aa3.8□□□□□ -1.8
XRN1-202ENST00000392981 GOLGA6L4A6NEF3 574 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 A6NL46 340 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SOBPA7XYQ1 873 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 STMND1H3BQB6 276 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MASP2O00187 686 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 BNIP3LO60238 219 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SRGAP2O75044 1071 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PTP4A3O75365 173 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SBK2P0C263 348 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 HDCP19113 662 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 GDI1P31150 447 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTNNB1P35222 781 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MANFP55145 182 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 HABP2Q14520 560 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 CCDC178Q5BJE1 867 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ZC3H12AQ5D1E8 599 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 RSPO2Q6UXX9 243 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 RAB11FIP2Q7L804 512 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 GLB1L2Q8IW92 636 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FSTL5Q8N475 847 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 PRR18Q8N4B5 295 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 AOPEPQ8N6M6 819 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MNS1Q8NEH6 495 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 BICD1Q96G01 975 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FANCD2OSQ96PS1 177 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FOXP3Q9BZS1 431 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 HCFC1R1Q9NWW0 138 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 INTS6Q9UL03 887 aaKnown RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 USP15Q9Y4E8 981 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 J3KTA2 159 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 M0QYG6 137 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PLATP00750 562 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 HEXBP07686 556 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KLRK1P26718 216 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MRE11P49959 708 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 RUNX2Q13950 521 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KCNAB1Q14722 419 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 GRIK5Q16478 980 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 BOLA3Q53S33 107 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ILDR2Q71H61 639 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 NLGN2Q8NFZ4 835 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 NCSTNQ92542 709 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KCNJ9Q92806 393 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FAM129AQ9BZQ8 928 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 C1orf21Q9H246 121 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 FETUBQ9UGM5 382 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 MID2Q9UJV3 735 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ST14Q9Y5Y6 855 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PSAT1Q9Y617 370 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PRR36Q9H6K5 1346 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 SYNRGQ9UMZ2 1314 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ZBTB42B2RXF5 422 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 KIF28PB7ZC32 967 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 RNF103O00237 685 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 AURKAO14965 403 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 ATP6V1G1O75348 118 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 PENKP01210 267 aaPredicted RBP3.79□□□□□ -1.8
XRN1-202ENST00000392981 CD1AP06126 327 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CCDC159P0C7I6 412 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 UBL4AP11441 157 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CPT2P23786 658 aa3.79□□□□□ -1.8
XRN1-202ENST00000392981 CTSSP25774 331 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms