RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 MYPNQ86TC9 1320 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 RPA3P35244 121 aaPredicted RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 SLC8A3P57103 927 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 C12orf65Q9H3J6 166 aaKnown RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 CCDC134Q9H6E4 229 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 PDGFCQ9NRA1 345 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 ARHGAP28Q9P2N2 729 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 P4HA2O15460 535 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 ENTPD5O75356 428 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 HLA-DRAP01903 254 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 PSMC4P43686 418 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 FASTKD3Q14CZ7 662 aaKnown RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 SIX1Q15475 284 aaPredicted RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 CLEC16AQ2KHT3 1053 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 TSNAXIP1Q2TAA8 658 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 MCOLN2Q8IZK6 566 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 DTX3LQ8TDB6 740 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 NAF1Q96HR8 494 aaKnown RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 PCYT2Q99447 389 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 NTPCRQ9BSD7 190 aaKnown RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 INO80BQ9C086 356 aaPredicted RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 PORCNQ9H237 461 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
BRF1-204ENST00000392557 SMIM24O75264 130 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 DCTN3O75935 186 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 TROVE2P10155 538 aaKnown RBP eCLIP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TXNP10599 105 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 KRT4P19013 534 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 CCNHP51946 323 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 PTK6Q13882 451 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 GPR162Q16538 588 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 BBS9Q3SYG4 887 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 TAF1BQ53T94 588 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TLDC1Q6P9B6 456 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 LVRNQ6Q4G3 990 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 PALM2Q8IXS6 379 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 THNSL1Q8IYQ7 743 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 CD101Q93033 1021 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 RLFQ13129 1914 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 EXTL3O43909 919 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 WDR4P57081 412 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TAS2R40P59535 323 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 CAPSQ13938 189 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 MAP1SQ66K74 1059 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TMEM130Q8N3G9 435 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 ARMC2Q8NEN0 867 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 GRAMD1AQ96CP6 724 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 SLC10A4Q96EP9 437 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 L3MBTL3Q96JM7 780 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 ARHGEF3Q9NR81 526 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 NKX1-2Q9UD57 310 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 DNPEPQ9ULA0 475 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 GINS2Q9Y248 185 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 H0YCG3 227 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 EDN1P05305 212 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 PECAM1P16284 738 aaPredicted RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TNFSF9P41273 254 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 HADHBP55084 474 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 MGAT5Q09328 741 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 PYROXD1Q8WU10 500 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 STMN2Q93045 179 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 MPHOSPH6Q99547 160 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 TMEM121Q9BTD3 319 aa11.41□□□□□ -0.58
BRF1-204ENST00000392557 IQCGQ9H095 443 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 DHX33Q9H6R0 707 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 METTL5Q9NRN9 209 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 SPATS2LQ9NUQ6 558 aaKnown RBP11.41□□□□□ -0.58
BRF1-204ENST00000392557 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.41□□□□□ -0.58
BRF1-204ENST00000392557 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 ATP8B3O60423 1300 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 PTPRJQ12913 1337 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 A0A1W2PPM1 405 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 OSBPP22059 807 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 GARTP22102 1010 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 GNA15P30679 374 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 CLCN3P51790 818 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 SNRPFP62306 86 aaKnown RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 SCARA5Q6ZMJ2 495 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 GLIS1Q8NBF1 620 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 TTC8Q8TAM2 541 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 PSPC1Q8WXF1 523 aaKnown RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 TTC17Q96AE7 1141 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.58
BRF1-204ENST00000392557 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
BRF1-204ENST00000392557 PDLIM7Q9NR12 457 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms