RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 RNF220Q5VTB9 566 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 WDR59Q6PJI9 974 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZBTB8BQ8NAP8 495 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM136AQ96C01 138 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PGBD4Q96DM1 585 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 TIPINQ9BVW5 301 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CCDC134Q9H6E4 229 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SERTAD1Q9UHV2 236 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CCDC194A0A1B0GVG4 234 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 A0A1W2PQC6 194 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 KRT16P08779 473 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CDC25AP30304 524 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RFC5P40937 340 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ALDH7A1P49419 539 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ERVFC1P60507 584 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 COPS2P61201 443 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 FAM133BQ5BKY9 247 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CCDC80Q76M96 950 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 RBM23Q86U06 439 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DYDC1Q8WWB3 177 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PBKQ96KB5 322 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 DLGAP2Q9P1A6 1054 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 LUC7L2Q9Y383 392 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
TRAF3IP2-208ENST00000392556 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 STBD1O95210 358 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IDO1P14902 403 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 HSD17B3P37058 310 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SKIV2L2P42285 1042 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 QARSP47897 775 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PHEXP78562 749 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CDK17Q00537 523 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 GUCY2DQ02846 1103 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UGCGQ16739 394 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ODF2Q5BJF6 829 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 OTUD6AQ7L8S5 288 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NEK8Q86SG6 692 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KLHL29Q96CT2 875 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RNPEPL1Q9HAU8 725 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PCDH18Q9HCL0 1135 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 DZANK1Q9NVP4 752 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SUCLA2Q9P2R7 463 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NR2E1Q9Y466 385 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UBOX5O94941 541 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TDP2O95551 362 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 P4HBP07237 508 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MYBP10242 640 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MYBL1P10243 752 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PAX3P23760 479 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 PHKA2P46019 1235 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 GUCY2FP51841 1108 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 NUBP1P53384 320 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TMC7Q7Z402 723 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 SLFN12Q8IYM2 578 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 ENDOVQ8N8Q3 282 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MRPL43Q8N983 215 aaKnown RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 TMEM98Q9Y2Y6 226 aa12.08□□□□□ -0.48
TRAF3IP2-208ENST00000392556 EVPLQ92817 2033 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms