RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 PSMC3P17980 439 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 DDX39BQ13838 428 aaKnown RBP12.37□□□□□ -0.43
CIT-203ENST00000392521 BNIPLQ7Z465 357 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 INTS13Q9NVM9 706 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 ARL2BPQ9Y2Y0 163 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
CIT-203ENST00000392521 TALDO1P37837 337 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 MAPK9P45984 424 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
CIT-203ENST00000392521 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 NT5C1AQ9BXI3 368 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
CIT-203ENST00000392521 OSGEPL1Q9H4B0 414 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 KLHL20Q9Y2M5 609 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 IPPQ9Y573 584 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 LAMC1P11047 1609 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 MCAMP43121 646 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 PDK1Q15118 436 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 ARMCX4Q5H9R4 360 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
CIT-203ENST00000392521 UCMAQ8WVF2 138 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 MYH8P13535 1937 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 MYH3P11055 1940 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 HSMCR30P0CW71 290 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 CPT1AP50416 773 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
CIT-203ENST00000392521 KIAA0556O60303 1618 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 MGAT4DA6NG13 374 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 TRIM25Q14258 630 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 TAF1CQ15572 869 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 RTL3Q8N8U3 475 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
CIT-203ENST00000392521 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 ERAP1Q9NZ08 941 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 RESTQ13127 1097 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 MED8Q96G25 268 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 PITPNM2Q9BZ72 1349 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 TTC33Q6PID6 262 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 PIH1D3Q9NQM4 214 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 INSRP06213 1382 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 EFL1Q7Z2Z2 1120 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 SERAC1Q96JX3 654 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 HEG1Q9ULI3 1381 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 ZW10O43264 779 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 IL18RAPO95256 599 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 SGSM1Q2NKQ1 1148 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 AGAP9Q5VTM2 703 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 SEPT12Q8IYM1 358 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 WDR35Q9P2L0 1181 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 TNNI3P19429 210 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 KRR1Q13601 381 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 SIX5Q8N196 739 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 BLOC1S5Q8TDH9 187 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 OLFM1Q99784 485 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 DCDC2Q9UHG0 476 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 TMEM117Q9H0C3 514 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 AVENQ9NQS1 362 aaPredicted RBP12.36□□□□□ -0.43
CIT-203ENST00000392521 RGS18Q9NS28 235 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
CIT-203ENST00000392521 POU1F1P28069 291 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 MAPKAPK2P49137 400 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 SLC11A2P49281 568 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 CYLC2Q14093 348 aaPredicted RBP12.35□□□□□ -0.43
CIT-203ENST00000392521 RCN1Q15293 331 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 STILQ15468 1287 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 PKN2Q16513 984 aaKnown RBP12.35□□□□□ -0.43
CIT-203ENST00000392521 DGKDQ16760 1214 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 MIEF1Q9NQG6 463 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 GNG14A0A1W2PPG7 69 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 PMPCBO75439 489 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 WEE1P30291 646 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 NT5C2P49902 561 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 USP11P51784 963 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
CIT-203ENST00000392521 EDRF1Q3B7T1 1238 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 PLA2G4FQ68DD2 849 aa12.35□□□□□ -0.43
CIT-203ENST00000392521 FAR2Q96K12 515 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms