RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 EPHB6O15197 1021 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 TNFAIP8O95379 198 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 CDH3P22223 829 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 SLC5A2P31639 672 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 PGM1P36871 562 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 CREB5Q02930 508 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 ZNF410Q86VK4 478 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 SLC7A5P1Q8MH63 180 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 OTUD5Q96G74 571 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RRN3Q9NYV6 651 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 FBXO9Q9UK97 447 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 NOX1Q9Y5S8 564 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 SPDYE16A6NNV3 312 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 CDH16O75309 829 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 STAT3P40763 770 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 MXI1P50539 228 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RPS3AP61247 264 aaKnown RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 E2F2Q14209 437 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RRP1BQ14684 758 aaKnown RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 TMPRSS6Q8IU80 811 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 FAM172AQ8WUF8 416 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 ART4Q93070 314 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 OSBPL8Q9BZF1 889 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 SENP6Q9GZR1 1112 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 RSL24D1Q9UHA3 163 aaKnown RBP17.11■□□□□ 0.33
TRA2A-202ENST00000392502 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
TRA2A-202ENST00000392502 PFASO15067 1338 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 C15orf38-AP3S2A0A0A6YYH1 394 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 E9PMD0 336 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 MARCH6O60337 910 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 STAM2O75886 525 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 KRT4P19013 534 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 RXRGP48443 463 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 EIF2B2P49770 351 aaKnown RBP17.1■□□□□ 0.33
TRA2A-202ENST00000392502 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-202ENST00000392502 KCNC4Q03721 635 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 MPP2Q14168 576 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 AOC3Q16853 763 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 EPM2AIP1Q7L775 607 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-202ENST00000392502 ARPINQ7Z6K5 226 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 CCDC77Q9BR77 488 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 RABGAP1Q9Y3P9 1069 aa17.1■□□□□ 0.33
TRA2A-202ENST00000392502 GH1P01241 217 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 APOEP02649 317 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 FGGP02679 453 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 RARBP10826 455 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 EPS15P42566 896 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 CDK9P50750 372 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 POTEHQ6S545 545 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 DCDC5Q6ZRR9 648 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 OLFM1Q99784 485 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 SMG5Q9UPR3 1016 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 SNX24Q9Y343 169 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 TBKBP1A7MCY6 615 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 POTECB2RU33 542 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 PFDN6O15212 129 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 KMOO15229 486 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 PRPF4O43172 522 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■□□□□ 9.3
TRA2A-202ENST00000392502 DGKIO75912 1065 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 PGM3O95394 542 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 GGPS1O95749 300 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 CDH2P19022 906 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 PCYT1AP49585 367 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 COASYQ13057 564 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 LONRF1Q17RB8 773 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 ZNF829Q3KNS6 432 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 CCDC14Q49A88 953 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 DNAL1Q4LDG9 190 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 POTEBQ6S5H4 581 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 MTDHQ86UE4 582 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 GUF1Q8N442 669 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 GPATCH1Q9BRR8 931 aaKnown RBP17.09■□□□□ 0.33
TRA2A-202ENST00000392502 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 SENP1Q9P0U3 644 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
TRA2A-202ENST00000392502 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms