RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 STIM1Q13586 685 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
RFC4-202ENST00000392481 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 ZNF699Q32M78 642 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 CFAP221Q4G0U5 840 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 ZNF667Q5HYK9 610 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 POTEHQ6S545 545 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 SHKBP1Q8TBC3 707 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 TAF4BQ92750 862 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
RFC4-202ENST00000392481 TSG101Q99816 390 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 MRPL45Q9BRJ2 306 aaKnown RBP12.66□□□□□ -0.38
RFC4-202ENST00000392481 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
RFC4-202ENST00000392481 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
RFC4-202ENST00000392481 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
RFC4-202ENST00000392481 WDFY4Q6ZS81 3184 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 PSMA7O14818 248 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 HCRTO43612 131 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 NARSO43776 548 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 ATP2C2O75185 946 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 ECI2O75521 394 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 P4HA1P13674 534 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 CYP2F1P24903 491 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 GTF2H1P32780 548 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 PPP1R2P41236 205 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 MAGEA11P43364 429 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 FKBP3Q00688 224 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 LRRC63Q05C16 580 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 TAF12Q16514 161 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 ANKRD40Q6AI12 368 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 ST13P5Q8NFI4 369 aaPredicted RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 OR6B3Q8NGW1 331 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 EEF2KMTQ96G04 330 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 DHTKD1Q96HY7 919 aaPredicted RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
RFC4-202ENST00000392481 SLC2A4RGQ9NR83 387 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 WNT16Q9UBV4 365 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 FBXL21Q9UKT6 434 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.38
RFC4-202ENST00000392481 A0A1W2PRU2 124 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ASS1P00966 412 aaKnown RBP12.64□□□□□ -0.39
RFC4-202ENST00000392481 PDGFBP01127 241 aaPredicted RBP12.64□□□□□ -0.39
RFC4-202ENST00000392481 HLA-DRAP01903 254 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 GJA1P17302 382 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 CCNE1P24864 410 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 GABRR2P28476 465 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 GCLMP48507 274 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
RFC4-202ENST00000392481 PPP3CAQ08209 521 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 MORC3Q14149 939 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 TEAD2Q15562 447 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 CCDC142Q17RM4 750 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 TANGO2Q6ICL3 276 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 MYCBPAPQ8TBZ2 947 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 GIPC2Q8TF65 315 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ZSWIM3Q96MP5 696 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 KXD1Q9BQD3 176 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 TRPV4Q9HBA0 871 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
RFC4-202ENST00000392481 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
RFC4-202ENST00000392481 F5P12259 2224 aa12.64□□□□□ -0.39
RFC4-202ENST00000392481 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
RFC4-202ENST00000392481 STX10O60499 249 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 CLSTN1O94985 981 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 CFHP08603 1231 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 CSH1P0DML2 217 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 CSH2P0DML3 217 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 HMGA1P17096 107 aaKnown RBP12.63□□□□□ -0.39
RFC4-202ENST00000392481 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
RFC4-202ENST00000392481 BMP6P22004 513 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 FCARP24071 287 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 CDC25CP30307 473 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
RFC4-202ENST00000392481 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms