RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ELOVL4Q9GZR5 314 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 MAN1C1Q9NR34 630 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 AFF4Q9UHB7 1163 aaKnown RBP27.05■■□□□ 1.92
HOMER3-202ENST00000392351 FBXW11Q9UKB1 542 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 PCDHB4Q9Y5E5 795 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 FHOD1Q9Y613 1164 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 MTMR11A4FU01 709 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 GLP2RO95838 553 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 C1RP00736 705 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 UCHL3P15374 230 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 MDH1BQ5I0G3 518 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 IQCEQ6IPM2 695 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 FAM171BQ6P995 826 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 TMEM270Q6UE05 265 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 KREMEN2Q8NCW0 462 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 JAKMIP2Q96AA8 810 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 LPIN3Q9BQK8 851 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 XPO4Q9C0E2 1151 aaKnown RBP27.05■■□□□ 1.92
HOMER3-202ENST00000392351 GANQ9H2C0 597 aa27.05■■□□□ 1.92
HOMER3-202ENST00000392351 MYH10P35580 1976 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 NCK2O43639 380 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 NOL4O94818 638 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 TRIM21P19474 475 aaKnown RBP27.04■■□□□ 1.92
HOMER3-202ENST00000392351 RFX1P22670 979 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 SMARCB1Q12824 385 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 ADAM15Q13444 863 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 RAPGEF1Q13905 1077 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 SKIV2LQ15477 1246 aaKnown RBP27.04■■□□□ 1.92
HOMER3-202ENST00000392351 MAPRE1Q15691 268 aaKnown RBP27.04■■□□□ 1.92
HOMER3-202ENST00000392351 NFE2Q16621 373 aaPredicted RBP27.04■■□□□ 1.92
HOMER3-202ENST00000392351 EP400NLQ6ZTU2 488 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 ATAD1Q8NBU5 361 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 NEK11Q8NG66 645 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 MYCBPAPQ8TBZ2 947 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 CLDND1Q9NY35 253 aa27.04■■□□□ 1.92
HOMER3-202ENST00000392351 ABI2Q9NYB9 513 aaPredicted RBP27.04■■□□□ 1.92
HOMER3-202ENST00000392351 COL6A3P12111 3177 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 A0A1W2PQC6 194 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 EPHB6O15197 1021 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 VNN2O95498 520 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 TPM3P06753 285 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 SRGAP2BP0DMP2 458 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 ELF1P32519 619 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 RAD23BP54727 409 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 CRYBG2Q8N1P7 616 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 CASP10Q92851 521 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 DNAI2Q9GZS0 605 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 PLEKHA4Q9H4M7 779 aa27.03■■□□□ 1.92
HOMER3-202ENST00000392351 CBFA2T2O43439 604 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 CTC1Q2NKJ3 1217 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 LIN9Q5TKA1 542 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 SLC4A11Q8NBS3 891 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 MAFAQ8NHW3 353 aaPredicted RBP27.02■■□□□ 1.92
HOMER3-202ENST00000392351 MYLPFQ96A32 169 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 PABPC5Q96DU9 382 aaKnown RBP27.02■■□□□ 1.92
HOMER3-202ENST00000392351 PCED1BQ96HM7 432 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 TMEM176AQ96HP8 235 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 NAA15Q9BXJ9 866 aaKnown RBP27.02■■□□□ 1.92
HOMER3-202ENST00000392351 CYP4F11Q9HBI6 524 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 DPP7Q9UHL4 492 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 PCDHB5Q9Y5E4 795 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 XIRP2A4UGR9 3374 aa27.02■■□□□ 1.92
HOMER3-202ENST00000392351 SPDYE4A6NLX3 237 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 PRRG1O14668 218 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 SEC24AO95486 1093 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 KRT5P13647 590 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 POLR2FP61218 127 aaKnown RBP27.01■■□□□ 1.92
HOMER3-202ENST00000392351 CYP27A1Q02318 531 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 DUSP4Q13115 394 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 COL19A1Q14993 1142 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 ELMSAN1Q6PJG2 1045 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 TMEM184AQ6ZMB5 413 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 C4orf50Q6ZRC1 276 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 SPATA2LQ8IUW3 424 aaPredicted RBP27.01■■□□□ 1.92
HOMER3-202ENST00000392351 C12orf29Q8N999 325 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 RBBP8NLQ8NC74 664 aaPredicted RBP27.01■■□□□ 1.92
HOMER3-202ENST00000392351 SLC7A14Q8TBB6 771 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 SPPL2BQ8TCT7 592 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 C2orf15Q8WU43 125 aaKnown RBP27.01■■□□□ 1.92
HOMER3-202ENST00000392351 SHC3Q92529 594 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 CRISPLD1Q9H336 500 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 FAM49BQ9NUQ9 324 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 MAFFQ9ULX9 164 aa27.01■■□□□ 1.92
HOMER3-202ENST00000392351 USP8P40818 1118 aa27.01■■□□□ 1.91
HOMER3-202ENST00000392351 TCEAL8Q8IYN2 117 aa27.01■■□□□ 1.91
HOMER3-202ENST00000392351 TTC9BQ8N6N2 239 aa27.01■■□□□ 1.91
HOMER3-202ENST00000392351 HEXIM2Q96MH2 286 aaKnown RBP27.01■■□□□ 1.91
HOMER3-202ENST00000392351 NLRC4Q9NPP4 1024 aa27.01■■□□□ 1.91
HOMER3-202ENST00000392351 RNF225M0QZC1 329 aaPredicted RBP27■■□□□ 1.91
HOMER3-202ENST00000392351 TBX10O75333 385 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 C8AP07357 584 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 DRAP1Q14919 205 aaPredicted RBP27■■□□□ 1.91
HOMER3-202ENST00000392351 SARM1Q6SZW1 724 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 CCDC149Q6ZUS6 474 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 HDAC7Q8WUI4 952 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 RHOBTB2Q9BYZ6 727 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 DZANK1Q9NVP4 752 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 CNTN6Q9UQ52 1028 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 SLC27A5Q9Y2P5 690 aa27■■□□□ 1.91
HOMER3-202ENST00000392351 DAAM1Q9Y4D1 1078 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms