RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MAML3Q96JK9 1138 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ZSWIM1Q9BR11 485 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ILKAPQ9H0C8 392 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PIF1Q9H611 641 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PRDM5Q9NQX1 630 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 INTS13Q9NVM9 706 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 LSM1O15116 133 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF862O60290 1169 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 H2AFYO75367 372 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PSMB9P28065 219 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 COX10Q12887 443 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 MAPK6Q16659 721 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 RMND5BQ96G75 393 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 SPRTNQ9H040 489 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 RGS7P49802 495 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 FGD2Q7Z6J4 655 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 RUVBL2Q9Y230 463 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 FNTAP49354 379 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PCSK7Q16549 785 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 DCDC2Q9UHG0 476 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 CBX6O95503 412 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 TP53BP2Q13625 1128 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 UTS2BQ765I0 119 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 SNX31Q8N9S9 440 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 PLEKHA8Q96JA3 519 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 MED14O60244 1454 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 PHGDHO43175 533 aaKnown RBP16.79■□□□□ 0.28
SHANK1-204ENST00000391814 FAM20BO75063 409 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 ARMC4Q5T2S8 1044 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 CYP4A22Q5TCH4 519 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 SWSAP1Q6NVH7 229 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 MCPH1Q8NEM0 835 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 HDHD2Q9H0R4 259 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 SEMA6AQ9H2E6 1030 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 HUS1O60921 280 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 EYA4O95677 639 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 STX5Q13190 355 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 FAM160B2Q86V87 743 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 KLHL31Q9H511 634 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 NR5A2O00482 541 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF302Q9NR11 478 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 GABBR1Q9UBS5 961 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
SHANK1-204ENST00000391814 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 PSMG1O95456 288 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 PPP3CCP48454 512 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 CSTF3Q12996 717 aaKnown RBP16.79■□□□□ 0.28
SHANK1-204ENST00000391814 SGMS1Q86VZ5 419 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 THEM5Q8N1Q8 247 aa16.79■□□□□ 0.28
SHANK1-204ENST00000391814 ZCCHC7Q8N3Z6 543 aaKnown RBP16.79■□□□□ 0.28
SHANK1-204ENST00000391814 RIPK2O43353 540 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 GTF2H3Q13889 308 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 SCN4BQ8IWT1 228 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ACTRT1Q8TDG2 376 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 MROH7Q68CQ1 1323 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 H7C1W4 665 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 POLD3Q15054 466 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF184Q99676 751 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 IMPAD1Q9NX62 359 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 RABGEF1Q9UJ41 708 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 MYRFQ9Y2G1 1151 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 GLRA3O75311 464 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 DCTN2Q13561 401 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 FAXCQ5TGI0 409 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 GCNAQ96QF7 691 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 PAFAH2Q99487 392 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 TRIM54Q9BYV2 358 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 PEX1O43933 1283 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 GRAP2O75791 330 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 SOAT1P35610 550 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
SHANK1-204ENST00000391814 SHCBP1Q8NEM2 672 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 OR6Y1Q8NGX8 325 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 RALBP11234 206 aa16.78■□□□□ 0.28
SHANK1-204ENST00000391814 PRLRP16471 622 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms