RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 AVPR2P30518 371 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CLCN5P51795 746 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 VCPP55072 806 aaKnown RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 GPC5P78333 572 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CCDC142Q17RM4 750 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 MGAT5BQ3V5L5 792 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 FAM78AQ5JUQ0 283 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 ITIH5Q86UX2 942 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 ST13P5Q8NFI4 369 aaPredicted RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 ELSPBP1Q96BH3 223 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 FUBP3Q96I24 572 aaKnown RBP eCLIP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 MRPL45Q9BRJ2 306 aaKnown RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 CDH9Q9ULB4 789 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 R3HCC1Q9Y3T6 440 aaKnown RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 RIF1Q5UIP0 2472 aaKnown RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 ATP2C2O75185 946 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 SMC2O95347 1197 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 FGF19O95750 216 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYL4P12829 197 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 GJA1P17302 382 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 CYP2F1P24903 491 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 RPL13P26373 211 aaKnown RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 WEE1P30291 646 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 GNL1P36915 607 aaPredicted RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 MAGEA11P43364 429 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 VAMP7P51809 220 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 CDR1P51861 262 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 ADAM9Q13443 819 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 TRPC3Q13507 836 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 NCOA4Q13772 614 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 TEAD2Q15562 447 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 IER5LQ5T953 404 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 CWF19L1Q69YN2 538 aaKnown RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 ADSSL1Q8N142 457 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 GPR152Q8TDT2 470 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 SEPT5Q99719 369 aaPredicted RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 KXD1Q9BQD3 176 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 SYT15Q9BQS2 421 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 ABI2Q9NYB9 513 aaPredicted RBP12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
IGHV4-28-201ENST00000390612 DMDP11532 3685 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 FANCMQ8IYD8 2048 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 NCANO14594 1321 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 A0A1W2PRU2 124 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 F11P03951 625 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 CFHP08603 1231 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 BMP6P22004 513 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 GPR15P49685 360 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 NUBP1P53384 320 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 PPP3CAQ08209 521 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 VEPH1Q14D04 833 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 ASTLQ6HA08 431 aaPredicted RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 TMEM105Q8N8V8 129 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYCBPAPQ8TBZ2 947 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 TAF4BQ92750 862 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 SMARCD2Q92925 531 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYRFLQ96LU7 910 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 CEP295NLQ96MC4 621 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 SDCBP2Q9H190 292 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 ZFP14Q9HCL3 533 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 MAN1B1Q9UKM7 699 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
IGHV4-28-201ENST00000390612 SHISA7A6NL88 538 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 PHACTR2O75167 634 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 NOL4O94818 638 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 HLA-DRAP01903 254 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 PDGFRBP09619 1106 aa12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
IGHV4-28-201ENST00000390612 GABRR2P28476 465 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms