RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SOX8P57073 446 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 BMPR2Q13873 1038 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 TMEM119Q4V9L6 283 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF551Q7Z340 670 aaPredicted RBP4.32□□□□□ -1.72
TRAV40-201ENST00000390467 C1QL2Q7Z5L3 287 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
TRAV40-201ENST00000390467 BRIX1Q8TDN6 353 aaKnown RBP4.32□□□□□ -1.72
TRAV40-201ENST00000390467 DDX17Q92841 729 aaKnown RBP4.32□□□□□ -1.72
TRAV40-201ENST00000390467 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 REPS1Q96D71 796 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF778Q96MU6 729 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 ARHGEF3Q9NR81 526 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 IP6K2Q9UHH9 426 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 SERTAD3Q9UJW9 196 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 PCDHA6Q9UN73 950 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 SSX2IPQ9Y2D8 614 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 TARM1B6A8C7 271 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 ABLIM3O94929 683 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 CELA2AP08217 269 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 AKAP5P24588 427 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 LILRA4P59901 499 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 LONRF3Q496Y0 759 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 GRAMD1CQ8IYS0 662 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 ATRIPQ8WXE1 791 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 NUP88Q99567 741 aaPredicted RBP4.31□□□□□ -1.72
TRAV40-201ENST00000390467 CGRRF1Q99675 332 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 ARMT1Q9H993 441 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 AASDHPPTQ9NRN7 309 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 STXBP5LQ9Y2K9 1186 aa4.31□□□□□ -1.72
TRAV40-201ENST00000390467 FNDC1Q4ZHG4 1894 aaPredicted RBP4.3□□□□□ -1.72
TRAV40-201ENST00000390467 WDR91A4D1P6 747 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 NXPH3O95157 252 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 GRPP07492 148 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 IL6RP08887 468 aaPredicted RBP4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF81P51508 661 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 LOXL3P58215 753 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 CCDC157Q569K6 752 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 PLAC9Q5JTB6 97 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ATAT1Q5SQI0 421 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 TREML2Q5T2D2 321 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 TEDDM1Q5T9Z0 273 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF66Q6ZN08 573 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 DTX2Q86UW9 622 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 STAG1Q8WVM7 1258 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ATG4AQ8WYN0 398 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 MRGPRX1Q96LB2 322 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 MAP3K14Q99558 947 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 C1QTNF7Q9BXJ2 289 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 RHOBTB2Q9BYZ6 727 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 BRINP2Q9C0B6 783 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 DLL3Q9NYJ7 618 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF70Q9UC06 446 aaPredicted RBP4.3□□□□□ -1.72
TRAV40-201ENST00000390467 STAP2Q9UGK3 403 aa4.3□□□□□ -1.72
TRAV40-201ENST00000390467 SLC16A3O15427 465 aaKnown RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 LATS1O95835 1130 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 ATXN1LP0C7T5 689 aaKnown RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 NDUFB7P17568 137 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 PPIFP30405 207 aaKnown RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 RAB1AP62820 205 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 MCL1Q07820 350 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 LLGL1Q15334 1064 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 PROSER3Q2NL68 480 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 ICE2Q659A1 982 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 VGLL2Q8N8G2 317 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 SEMA6DQ8NFY4 1073 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 DIS3LQ8TF46 1054 aaKnown RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 MACROD1Q9BQ69 325 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 RTFDC1Q9BY42 306 aaPredicted RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 SLC29A3Q9BZD2 475 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 SH3BP4Q9P0V3 963 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 CPA4Q9UI42 421 aa4.29□□□□□ -1.72
TRAV40-201ENST00000390467 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAV40-201ENST00000390467 TISP43B9A030 160 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 hCG_1984214I3L0E3 225 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 ERC2O15083 957 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 FESP07332 822 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 CYP2C18P33260 490 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 PXNP49023 591 aaPredicted RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 SLC10A2Q12908 348 aaPredicted RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 PIN1Q13526 163 aaPredicted RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 IQCB1Q15051 598 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 EZH2Q15910 746 aaKnown RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 CEP85Q6P2H3 762 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 COL23A1Q86Y22 540 aaPredicted RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 GLG1Q92896 1179 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 NELL2Q99435 816 aa4.28□□□□□ -1.72
TRAV40-201ENST00000390467 P2RX7Q99572 595 aaKnown RBP4.28□□□□□ -1.72
TRAV40-201ENST00000390467 PTDSS2Q9BVG9 487 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms