RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ITIH2P19823 946 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 XRRA1Q6P2D8 792 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 FBXO41Q8TF61 875 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 IFT43Q96FT9 208 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 WDR81Q562E7 1941 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 SPDYE16A6NNV3 312 aaPredicted RBP18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 SPATA31C2B4DYI2 1134 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 TBX10O75333 385 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 FDX1P10109 184 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 RRM1P23921 792 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 IVDP26440 423 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 SLC1A5Q15758 541 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 RBM41Q96IZ5 413 aaKnown RBP18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 GBP5Q96PP8 586 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 RLFQ13129 1914 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 EDN1P05305 212 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 CA4P22748 312 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 EMC2Q15006 297 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 RASIP1Q5U651 963 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 ACAD10Q6JQN1 1059 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 KLRG1Q96E93 195 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 LRRC19Q9H756 370 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 GGA3Q9NZ52 723 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 GTF3C4Q9UKN8 822 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 EDF1O60869 148 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 PIAS1O75925 651 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 HARSP12081 509 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 PLEKHG4Q58EX7 1191 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 LRRC74BQ6ZQY2 392 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 EEPD1Q7L9B9 569 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 OTOAQ7RTW8 1153 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 PASD1Q8IV76 773 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 MAIP1Q8WWC4 291 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 CCDC77Q9BR77 488 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 C12orf65Q9H3J6 166 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 C17orf75Q9HAS0 396 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 ALG13Q9NP73 1137 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 ANKFY1Q9P2R3 1169 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 R3HDM2Q9Y2K5 976 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 EXOC1LA0A1B0GW35 172 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 FZD9O00144 591 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 SUPT20HL2P0C7V6 817 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 GSTT1P30711 240 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 SPARCL1Q14515 664 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 TCEAL1Q15170 157 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 ZC3H12AQ5D1E8 599 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 TDRD10Q5VZ19 366 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 WDR60Q8WVS4 1066 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 TARS2Q9BW92 718 aaKnown RBP18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 TRABDQ9H4I3 376 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 LMCD1Q9NZU5 365 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 ANAPC7Q9UJX3 599 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 SH3BP1Q9Y3L3 701 aa18.62■□□□□ 0.57
SQSTM1-202ENST00000389805 TJP3O95049 919 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 ETS2P15036 469 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 MCCD1P59942 119 aaPredicted RBP18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 LRRC23Q53EV4 343 aaPredicted RBP18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 CMPK2Q5EBM0 449 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 KBTBD2Q8IY47 623 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 PRR11Q96HE9 360 aaPredicted RBP18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 LGALS13Q9UHV8 139 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 WASF2Q9Y6W5 498 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 TTLL13PA6NNM8 815 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 MTA2O94776 668 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 HLA-DRAP01903 254 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 GARTP22102 1010 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 GLRA2P23416 452 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 CLEC16AQ2KHT3 1053 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 XKR3Q5GH77 459 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 ARL8BQ9NVJ2 186 aa18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 AGO2Q9UKV8 859 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 ZNFX1Q9P2E3 1918 aaKnown RBP18.61■□□□□ 0.57
SQSTM1-202ENST00000389805 A0A0G2JND7 137 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 NEK3P51956 506 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 HIRAP54198 1017 aaPredicted RBP18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 TREML2Q5T2D2 321 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 C15orf39Q6ZRI6 1047 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 CLNKQ7Z7G1 428 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 MAML1Q92585 1016 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 C1orf112Q9NSG2 853 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 FBXO40Q9UH90 709 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 A0A1W2PPM1 405 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 VNN1O95497 513 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 OAZ1P54368 228 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 HHATQ5VTY9 493 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 TRABD2AQ86V40 505 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 RFWD2Q8NHY2 731 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 PSPC1Q8WXF1 523 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 TRAIPQ9BWF2 469 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 ZNF302Q9NR11 478 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms