RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 NCAM1P13591 858 aa12.83□□□□□ -0.36
KCNQ3-201ENST00000388996 ITIH2P19823 946 aa12.83□□□□□ -0.36
KCNQ3-201ENST00000388996 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 APOA1P02647 267 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 MUTP22033 750 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 GRIN1Q05586 938 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 USP15Q9Y4E8 981 aaPredicted RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 GOLGA8TH3BQL2 631 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 NTSR2O95665 410 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 DEPDC5O75140 1603 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 H0Y626 953 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 TRIM16O95361 564 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 BRD2P25440 801 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 PCYT1AP49585 367 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 CCDC85BQ15834 202 aaPredicted RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 ZFP42Q96MM3 310 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 C17orf102A2RUQ5 167 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 DNAL1Q4LDG9 190 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 DOCK7Q96N67 2140 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 CRLS1Q9UJA2 301 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SPTBN1Q01082 2364 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 ALDH7A1P49419 539 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 KCTD17Q8N5Z5 321 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SLC39A10Q9ULF5 831 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 LONRF1Q17RB8 773 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 RNF180Q86T96 592 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SLC25A13Q9UJS0 675 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 MTO1Q9Y2Z2 717 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SPTA1P02549 2419 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 RANBP17Q9H2T7 1088 aaKnown RBP12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 MPP6Q9NZW5 540 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 AGGF1Q8N302 714 aaeCLIP12.82□□□□□ -0.363e-8■■■■■ 40.6
KCNQ3-201ENST00000388996 RBBP8Q99708 897 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 CAPZA2P47755 286 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 CLEC17AQ6ZS10 378 aa12.82□□□□□ -0.36
KCNQ3-201ENST00000388996 H7C4K7 107 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 POU4F1Q01851 419 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 MRPL28Q13084 256 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 MDH1BQ5I0G3 518 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 SHCBP1Q8NEM2 672 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 SRP72O76094 671 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 CUL2Q13617 745 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 SLC30A1Q9Y6M5 507 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 KRT8P05787 483 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 AGBL1Q96MI9 1066 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 PPIL6Q8IXY8 311 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 GTF2H1P32780 548 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 LONP2Q86WA8 852 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 C4orf33Q8N1A6 199 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 VIPAS39Q9H9C1 493 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF229Q9UJW7 825 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 MAFGO15525 162 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 IMPDH2P12268 514 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 DYNC1I2Q13409 638 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 FBXO33Q7Z6M2 555 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 AGPAT5Q9NUQ2 364 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 CYP2B6P20813 491 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 ITGA8P53708 1063 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 ICE2Q659A1 982 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 DSEQ9UL01 958 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 TDRD10Q5VZ19 366 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 RFX8Q6ZV50 586 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 TRIM48Q8IWZ4 208 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 FRMD8Q9BZ67 464 aaPredicted RBP12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 TRPC5OSA6NMA1 111 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
KCNQ3-201ENST00000388996 KLHL2O95198 593 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 CYTH1Q15438 398 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 GOLPH3Q9H4A6 298 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 C2CD2LO14523 706 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 KLK7P49862 253 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 ZRANB3Q5FWF4 1079 aa12.8□□□□□ -0.36
KCNQ3-201ENST00000388996 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms