RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SEMA4DQ92854 862 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 COPS5Q92905 334 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 ERP27Q96DN0 273 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MYLK2Q9H1R3 596 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PPCSQ9HAB8 311 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 VTA1Q9NP79 307 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 TOPORSQ9NS56 1045 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 EURLQ9NYK6 297 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 IGKV6-21A0A0C4DH24 114 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PRPF4O43172 522 aaKnown RBP eCLIP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 LDHAP00338 332 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 DLATP10515 647 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 IVDP26440 423 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PCK1P35558 622 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MFAP3P55082 362 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 CLDN10P78369 228 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 CENPCQ03188 943 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 KLC1Q07866 573 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MXD4Q14582 209 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 KYNUQ16719 465 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 SV2AQ7L0J3 742 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MFN1Q8IWA4 741 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 NT5C1BQ96P26 610 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 TSC22D3Q99576 134 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 TARS2Q9BW92 718 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 DCLRE1BQ9H816 532 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 RAB20Q9NX57 234 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 SMG5Q9UPR3 1016 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 NAALADL1Q9UQQ1 740 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MROH7Q68CQ1 1323 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 RASA4BC9J798 803 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 RASA4O43374 803 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 HBP1O60381 514 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 SNUPNO95149 360 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 CELF2O95319 508 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ASMTLO95671 621 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 CHKAP35790 457 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ITGA8P53708 1063 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 RAD23BP54727 409 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ARHGAP1Q07960 439 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 LAMC2Q13753 1193 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 SPARCL1Q14515 664 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ANO7Q6IWH7 933 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 TAPT1Q6NXT6 567 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ZPBP2Q6X784 338 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 TDRPQ86YL5 185 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 FAM71AQ8IYT1 594 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 PPM1KQ8N3J5 372 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 FAM13CQ8NE31 585 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ATL2Q8NHH9 583 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF398Q8TD17 642 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 TAS1R2Q8TE23 839 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 FAM81BQ96LP2 452 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 PARK7Q99497 189 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 VCXQ9H320 206 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 NINJ2Q9NZG7 142 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 LNPEPQ9UIQ6 1025 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ANAPC5Q9UJX4 755 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 A0A0B4J269 797 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 RBM47A0AV96 593 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 CLDN3O15551 220 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ROR2Q01974 943 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 LAMTOR4Q0VGL1 99 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 TMEM63BQ5T3F8 832 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 C15orf39Q6ZRI6 1047 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 EGFL6Q8IUX8 553 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 RBBP8NLQ8NC74 664 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ZFAND2BQ8WV99 257 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 SHC3Q92529 594 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 KAT5Q92993 513 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 KREMEN1Q96MU8 473 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 FNBP1Q96RU3 617 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 HAPLN2Q9GZV7 340 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 TLE6Q9H808 572 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 SAR1AQ9NR31 198 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 STOML1Q9UBI4 398 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 NKX1-2Q9UD57 310 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 NOCTQ9UK39 431 aaKnown RBP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 PHTF1Q9UMS5 762 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 CHKBQ9Y259 395 aa9.42□□□□□ -0.9
GPNMB-202ENST00000381990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
GPNMB-202ENST00000381990 ENO4A6NNW6 628 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 CDC25CP30307 473 aa9.41□□□□□ -0.9
GPNMB-202ENST00000381990 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms