RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PHKA1P46020 1223 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 ERMARDQ5T6L9 678 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 CDKL3Q8IVW4 592 aaPredicted RBP5.09□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC33Q8N5R6 958 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 PNMA1Q8ND90 353 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 C9orf16Q9BUW7 83 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 INPP5FQ9Y2H2 1132 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 GIT1Q9Y2X7 761 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 SALL3Q9BXA9 1300 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 C4AP0C0L4 1744 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 C4BP0C0L5 1744 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 MAGEB16A2A368 324 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 IFRD1O00458 451 aaPredicted RBP5.09□□□□□ -1.6
PTPRD-203ENST00000381196 COPEO14579 308 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 DGKHQ86XP1 1220 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 PEX5LQ8IYB4 626 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 AP3S1Q92572 193 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 EDC3Q96F86 508 aaKnown RBP5.09□□□□□ -1.6
PTPRD-203ENST00000381196 LNPEPQ9UIQ6 1025 aa5.09□□□□□ -1.6
PTPRD-203ENST00000381196 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.6
PTPRD-203ENST00000381196 MYO1FO00160 1098 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TGFBR2P37173 567 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SULT2A1Q06520 285 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 DGUOKQ16854 277 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 FOXP4Q8IVH2 680 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 VPS37AQ8NEZ2 397 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 DDX20Q9UHI6 824 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GNPTGQ9UJJ9 305 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SLC13A4Q9UKG4 626 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PALD1Q9ULE6 856 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MYRFQ9Y2G1 1151 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 NCANO14594 1321 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SF3B1O75533 1304 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CFAP99D6REC4 459 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MMP13P45452 471 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ACAP2Q15057 778 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SYDE2Q5VT97 1194 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 RCOR2Q8IZ40 523 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ENDOVQ8N8Q3 282 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 FANCBQ8NB91 859 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 DQX1Q8TE96 717 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 STARD8Q92502 1023 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SNX19Q92543 992 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 BTBD6Q96KE9 485 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PLA2G12BQ9BX93 195 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TAB2Q9NYJ8 693 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PCDHGC5Q9Y5F6 944 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SPATA31A3Q5VYP0 1347 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 FAM92AA1XBS5 289 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ASB14A6NK59 587 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PSMC3P17980 439 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MARSP56192 900 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 RABL6Q3YEC7 729 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 APOA5Q6Q788 366 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 RINLQ6ZS11 566 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 FCGR1BQ92637 280 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PTPRN2Q92932 1015 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 NEDD4LQ96PU5 975 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 VPS11Q9H270 941 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ELP3Q9H9T3 547 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PNPLA8Q9NP80 782 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SUCOQ9UBS9 1254 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SEC14L4Q9UDX3 406 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SYNJ2BP-COX16A0A087WUM0 186 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TMEM247A6NEH6 219 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TMEM191CA6NGB0 347 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SEC31AO94979 1220 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 LSM8O95777 96 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CCNE2O96020 404 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CYP2J2P51589 502 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PTK2Q05397 1052 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 NFX1Q12986 1120 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF846Q147U1 533 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 BSPRYQ5W0U4 402 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 BICRALQ6AI39 1079 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SULT1C3Q6IMI6 304 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 LRRC74BQ6ZQY2 392 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TBC1D1Q86TI0 1168 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GIMAP8Q8ND71 665 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CAPSLQ8WWF8 208 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MMP19Q99542 508 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 RBBP8Q99708 897 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ASPSCR1Q9BZE9 553 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 COX16Q9P0S2 106 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ZNRF3Q9ULT6 936 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CICQ96RK0 1608 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 USP17L5A8MUK1 530 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 FCER1AP12319 257 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 BNIP2Q12982 314 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TTLL4Q14679 1199 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TC2NQ8N9U0 490 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SPDYE1Q8NFV5 336 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PIGBQ92521 554 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SYMPKQ92797 1274 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PAGE5Q96GU1 130 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GINS4Q9BRT9 223 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ZNF518BQ9C0D4 1074 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 NEUROG2Q9H2A3 272 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CPSF3Q9UKF6 684 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 USTQ9Y2C2 406 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms