RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TRIM49BA6NDI0 452 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PRR23AA6NEV1 266 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 CCL16O15467 120 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 XYLBO75191 536 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 ABLIM3O94929 683 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 SEC24AO95486 1093 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 HNRNPA1P09651 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 TRIM49P0CI25 452 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 TRIM49CP0CI26 452 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 BMP6P22004 513 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 CCNE1P24864 410 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PPP1R2P41236 205 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 VAMP7P51809 220 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 CDR1P51861 262 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PMS1P54277 932 aaKnown RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 MYL6P60660 151 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 INTS8Q75QN2 995 aaKnown RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 UBALD2Q8IYN6 164 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PDCL2Q8N4E4 241 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 OR10T2Q8NGX3 314 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF707Q96C28 371 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 DHTKD1Q96HY7 919 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 TMEM209Q96SK2 561 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 MMS19Q96T76 1030 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 OXCT2Q9BYC2 517 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 NUP62CLQ9H1M0 184 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 AFF4Q9UHB7 1163 aaKnown RBP9.91□□□□□ -0.82
HMGN1-202ENST00000380747 CTNND2Q9UQB3 1225 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 VWA8A3KMH1 1905 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 PLXNA3P51805 1871 aa9.91□□□□□ -0.82
HMGN1-202ENST00000380747 H0Y858 1186 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 MAPK13O15264 365 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 LRG1P02750 347 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 C4BPAP04003 597 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 ATF2P15336 505 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 ACAT1P24752 427 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 GCLMP48507 274 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 STX17P56962 302 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TNNC1P63316 161 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 CLDN10P78369 228 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 MYL7Q01449 175 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 SLC39A12Q504Y0 691 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TDRD10Q5VZ19 366 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TPGS2Q68CL5 300 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 CYP26C1Q6V0L0 522 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 SV2AQ7L0J3 742 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TOP6BLQ8N6T0 577 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 TRIML1Q8N9V2 468 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 RTP3Q9BQQ7 232 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 PRR14Q9BWN1 585 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 ZCWPW1Q9H0M4 648 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 DDX43Q9NXZ2 648 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
HMGN1-202ENST00000380747 NR2E1Q9Y466 385 aa9.9□□□□□ -0.82
HMGN1-202ENST00000380747 CLUHO75153 1309 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 NCOR2Q9Y618 2525 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 BICDL2A1A5D9 508 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 IKBKBO14920 756 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 VNN1O95497 513 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 HOXA9P31269 272 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ATICP31939 592 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 PIK3CAP42336 1068 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 NTHL1P78549 312 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 TSPY1Q01534 308 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 PPP3CAQ08209 521 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 TWF1Q12792 350 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 PAK1Q13153 545 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 GPR17Q13304 367 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 NCOA4Q13772 614 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 SOWAHAQ2M3V2 549 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ZACNQ401N2 412 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 DCAF17Q5H9S7 520 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ZNF667Q5HYK9 610 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 C1orf220Q5T0J3 134 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 TCERG1LQ5VWI1 586 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ASCL5Q7RTU5 278 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 GRASPQ7Z6J2 395 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 TCEAL8Q8IYN2 117 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 DCP1BQ8IZD4 617 aaKnown RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 TDRD5Q8NAT2 981 aaKnown RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ATAD1Q8NBU5 361 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 SYAP1Q96A49 352 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 ELMO3Q96BJ8 720 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 POM121Q96HA1 1249 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms