RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PPP1R2P3Q6NXS1 205 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 RPAP3Q9H6T3 665 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 C5orf60A6NFR6 353 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 UNC5CO95185 931 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ASNSP08243 561 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 MYL3P08590 195 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ZCCHC18P0CG32 403 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 PRKCEQ02156 737 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 CHI3L2Q15782 390 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 PPIL6Q8IXY8 311 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 SLC25A41Q8N5S1 370 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 CENPKQ9BS16 269 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 PAEPP09466 180 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ADRA1DP25100 572 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 BAATQ14032 418 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ST13P4Q8IZP2 240 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 TCP10LQ8TDR4 215 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 TEKT4Q8WW24 435 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 CDKL2Q92772 493 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 MOV10L1Q9BXT6 1211 aaKnown RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 LRRC19Q9H756 370 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ATP9AO75110 1047 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 RAP1GAPP47736 663 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 RARRES1P49788 294 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 EMC2Q15006 297 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 RAPH1Q70E73 1250 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 HSD17B14Q9BPX1 270 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 HERC5Q9UII4 1024 aaKnown RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 APOBEC2Q9Y235 224 aaKnown RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 GNAT1P11488 350 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 PTPN4P29074 926 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 CIITAP33076 1130 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 OTUD4Q01804 1114 aaKnown RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF75CPQ92670 426 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-202ENST00000379826 hCG_2014768A0A024R1R8 64 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 A0A1W2PPM1 405 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 KRT7P08729 469 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CETPP11597 493 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 DRG2P55039 364 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 MAP7Q14244 749 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CYP4X1Q8N118 509 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RNF34Q969K3 372 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 C12orf65Q9H3J6 166 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 PYGBP11216 843 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 SERPINB4P48594 390 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ATXN3P54252 364 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 COG7P83436 770 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 MFSD7Q6UXD7 560 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 LRRC6Q86X45 466 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RAB6BQ9NRW1 208 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 MEI4A8MW99 385 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 DNALI1O14645 258 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CYP3A4P08684 503 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 IGFBP4P22692 258 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 GSCP56915 257 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 TAS2R40P59535 323 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 GABPAQ06546 454 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 GEN1Q17RS7 908 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF677Q86XU0 584 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ECHDC2Q86YB7 292 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 MIPOL1Q8TD10 442 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 VPS11Q9H270 941 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ASNSD1Q9NWL6 643 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 MTO1Q9Y2Z2 717 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 APRTP07741 180 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ATP4AP20648 1035 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF667Q5HYK9 610 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CDR2LQ86X02 465 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 TARS2Q9BW92 718 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RPF1Q9H9Y2 349 aaKnown RBP11.92□□□□□ -0.5
SMAD9-202ENST00000379826 RFC5P40937 340 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 CUL3Q13618 768 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 STRIP2Q9ULQ0 834 aa11.92□□□□□ -0.5
SMAD9-202ENST00000379826 KRT38O76015 456 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 CHRNB2P17787 502 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 MRPS35P82673 323 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms