RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TMEM150AQ86TG1 271 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 DCP1BQ8IZD4 617 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 SPPL2BQ8TCT7 592 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 MRPS31Q92665 395 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 TSPAN18Q96SJ8 248 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 P2RY13Q9BPV8 354 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 PARVGQ9HBI0 331 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 VPS45Q9NRW7 570 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 TDP1Q9NUW8 608 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 TMLHEQ9NVH6 421 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 ODF2LQ9ULJ1 636 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 PCDHB5Q9Y5E4 795 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 PCDHGA5Q9Y5G8 931 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 CCDC163A0A0D9SF12 145 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 ANO9A1A5B4 782 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 ANKRD63C9JTQ0 380 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 TRAK2O60296 914 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 TBCAO75347 108 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 PIGRP01833 764 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 F11P03951 625 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 NEFLP07196 543 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 ADRB2P07550 413 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 AMPD2Q01433 879 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 MCM6Q14566 821 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 LSM14BQ9BX40 385 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 KIF9Q9HAQ2 790 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 CHD6Q8TD26 2715 aa19.18■□□□□ 0.66
PDLIM4-202ENST00000379018 FRYQ5TBA9 3013 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 C4orf47A7E2U8 309 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 GIPC1O14908 333 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 HMGA1P17096 107 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DRD1P21728 446 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 PAX3P23760 479 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DDX6P26196 483 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 GJA4P35212 333 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DGKEP52429 567 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 TSPY1Q01534 308 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 ZC2HC1CQ53FD0 456 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 CPA6Q8N4T0 437 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 CAMKK1Q8N5S9 505 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 LRRC15Q8TF66 581 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DUSP15Q9H1R2 295 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 IKZF4Q9H2S9 585 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DUS2Q9NX74 493 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 ZMYM5Q9UJ78 669 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 DERAQ9Y315 318 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 WNT6Q9Y6F9 365 aa19.17■□□□□ 0.66
PDLIM4-202ENST00000379018 LAMA1P25391 3075 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 ABCA7Q8IZY2 2146 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 MYO16Q9Y6X6 1858 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 AKAP3O75969 853 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 RHOBTB1O94844 696 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 APBB3O95704 486 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 CAVIN2O95810 425 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 ACAT1P24752 427 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 IFNAR2P48551 515 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 SHC2P98077 582 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 FOXC1Q12948 553 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 DMC1Q14565 340 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 MTF1Q14872 753 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 PDGFRLQ15198 375 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 DDR2Q16832 855 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 SV2CQ496J9 727 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 TTC30AQ86WT1 665 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 EFCAB13Q8IY85 973 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 CD101Q93033 1021 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 ZC3H10Q96K80 434 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 TPSD1Q9BZJ3 242 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 ECT2Q9H8V3 914 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 AGO2Q9UKV8 859 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 C2CD2Q9Y426 696 aa19.16■□□□□ 0.66
PDLIM4-202ENST00000379018 NUP205Q92621 2012 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 CEP295Q9C0D2 2601 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 KPNA7A9QM74 516 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 C1QTNF9BB2RNN3 333 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 CKMP06732 381 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 C1QTNF9P0C862 333 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 CSH1P0DML2 217 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 CSH2P0DML3 217 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 PLCG1P19174 1290 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 SPINK2P20155 84 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 UBA7P41226 1012 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 SEC13P55735 322 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 ZNF252P-AS1Q0IIN9 211 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 SMARCB1Q12824 385 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 KARSQ15046 597 aaKnown RBP19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 MON1AQ86VX9 555 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 ZNF560Q96MR9 790 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 CYP2S1Q96SQ9 504 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 ASB7Q9H672 318 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 THADAQ6YHU6 1953 aa19.15■□□□□ 0.66
PDLIM4-202ENST00000379018 H3BQV1 296 aa19.14■□□□□ 0.65
PDLIM4-202ENST00000379018 EIF5BO60841 1220 aaKnown RBP19.14■□□□□ 0.65
PDLIM4-202ENST00000379018 TADA3O75528 432 aa19.14■□□□□ 0.65
PDLIM4-202ENST00000379018 CYP2F1P24903 491 aa19.14■□□□□ 0.65
PDLIM4-202ENST00000379018 ZNF131P52739 623 aa19.14■□□□□ 0.65
PDLIM4-202ENST00000379018 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms