RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MMAAQ8IVH4 418 aaKnown RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 LILRB4Q8NHJ6 448 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 GNPTGQ9UJJ9 305 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 CYP2D7A0A087X1C5 515 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 C16orf96A6NNT2 1141 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 VWA5AO00534 786 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 TRAF2Q12933 501 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 EFTUD2Q15029 972 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 POTEHQ6S545 545 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 NET1Q7Z628 596 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 SLC25A41Q8N5S1 370 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF717Q9BY31 904 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 NOX1Q9Y5S8 564 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 WASF2Q9Y6W5 498 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 AGLP35573 1532 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 M0QX08 132 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ATL1Q8WXF7 558 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 TLCD1Q96CP7 247 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 SEZ6LQ9BYH1 1024 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 GPRC5DQ9NZD1 345 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 STARD13Q9Y3M8 1113 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 CENPXA8MT69 81 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ZC3H11AO75152 810 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ATP2C1P98194 919 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 TTC27Q6P3X3 843 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 Q6ZNX1 250 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 HACE1Q8IYU2 909 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 PPP1R10Q96QC0 940 aaKnown RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 MKNK1Q9BUB5 465 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 PKD2L2Q9NZM6 624 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 K7EPI3 171 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 GSC2O15499 205 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ACSL4O60488 711 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 GSNP06396 782 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 RASA1P20936 1047 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 GUCY1A2P33402 732 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 DSTNP60981 165 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 MDH1BQ5I0G3 518 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 SDE2Q6IQ49 451 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ZC3H15Q8WU90 426 aaKnown RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 PLA2G12BQ9BX93 195 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 SENP1Q9P0U3 644 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ADAMTS1Q9UHI8 967 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 TSPAN4O14817 238 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ICMTO60725 284 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 EYA4O95677 639 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ACTN1P12814 892 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 DEFA1P59665 94 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 DEFA3P59666 94 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 ACAP2Q15057 778 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 HLFQ16534 295 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 RMND5BQ96G75 393 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-202ENST00000378161 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 MYRFQ9Y2G1 1151 aa12.28□□□□□ -0.44
NPHP4-202ENST00000378161 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 IQANK1A0A1B0GTG1 560 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 TTKP33981 857 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 GJC1P36383 396 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 MAPK11Q15759 364 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 GALNTL6Q49A17 601 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 TBCKQ8TEA7 893 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 PIGBQ92521 554 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 TTC25Q96NG3 672 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 WWP1Q9H0M0 922 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.44
NPHP4-202ENST00000378161 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-202ENST00000378161 HSD17B4P51659 736 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 COPZ1P61923 177 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ACVR2BQ13705 512 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 PLS1Q14651 629 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 SNX17Q15036 470 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 ARHGAP44Q17R89 818 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 STX12Q86Y82 276 aa12.27□□□□□ -0.45
NPHP4-202ENST00000378161 UNC45BQ8IWX7 931 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms