RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 PTPROQ16827 1216 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 LRRC71Q8N4P6 559 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 FNBP1Q96RU3 617 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 APOBEC3GQ9HC16 384 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 ANKFY1Q9P2R3 1169 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 AMFRQ9UKV5 643 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 TTC7AQ9ULT0 858 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 SH3GLB1Q9Y371 365 aa13.14□□□□□ -0.31
CEACAM1-205ENST00000377806 MCM3APO60318 1980 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 A6NHS1 94 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 H3BQF6 201 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 HBP1O60381 514 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 TOM1L1O75674 476 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 RASSF9O75901 435 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 CYP1A2P05177 515 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 PROZP22891 400 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 ADORA2AP29274 412 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 GTF2A2P52657 109 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 GPC5P78333 572 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 MCL1Q07820 350 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 GSPT2Q8IYD1 628 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 TRAPPC12Q8WVT3 735 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 UROC1Q96N76 676 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 GDF3Q9NR23 364 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 STK39Q9UEW8 545 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
CEACAM1-205ENST00000377806 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 H0YC42 278 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 HOXA2O43364 376 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 B3GALNT1O75752 331 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 GNAT1P11488 350 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 TNNI1P19237 187 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CD9P21926 228 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 TNFSF9P41273 254 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 VEGFBP49765 207 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 PDE6CP51160 858 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 TPD52P55327 224 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CCNA1P78396 465 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CCL15Q16663 113 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 NT5DC4Q86YG4 428 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 LINC01465Q8N7H1 131 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 C2orf69Q8N8R5 385 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CLIP3Q96DZ5 547 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 C2orf40Q9H1Z8 148 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 FZD8Q9H461 694 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 GALNT8Q9NY28 637 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 NOC2LQ9Y3T9 749 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 FAM170AA1A519 330 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 PGRMC1O00264 195 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CLDN3O15551 220 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 AOC2O75106 756 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 NPTXRO95502 500 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 C22orf31O95567 290 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 PRKCBP05771 671 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 GLI1P08151 1106 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 RNASE9P60153 205 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 FKBP1BP68106 108 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 LAMC2Q13753 1193 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 SPOPLQ6IQ16 392 aa13.12□□□□□ -0.31
CEACAM1-205ENST00000377806 ACAD10Q6JQN1 1059 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms