RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CCDC130P13994 396 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 GDF6Q6KF10 455 aaPredicted RBP8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 C17orf99Q6UX52 265 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 RAPH1Q70E73 1250 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 DUSP9Q99956 384 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 CORO1BQ9BR76 489 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 FGFBP2Q9BYJ0 223 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 SMYD3Q9H7B4 428 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 RRAGDQ9NQL2 400 aaPredicted RBP8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 IPO11Q9UI26 975 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 ATP8A1Q9Y2Q0 1164 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 SNX24Q9Y343 169 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 PCDHA2Q9Y5H9 948 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 ITGB4P16144 1822 aa8.9□□□□□ -0.98
CRNKL1-202ENST00000377340 PLD1Q13393 1074 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 NPY5RQ15761 445 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 NDUFAF2Q8N183 169 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 OR6P1Q8NGX9 317 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF606Q8WXB4 792 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 ZBED3Q96IU2 234 aaPredicted RBP8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 TRIM7Q9C029 511 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 DDX47Q9H0S4 455 aaKnown RBP8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 BARX2Q9UMQ3 279 aaPredicted RBP8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 MAFBQ9Y5Q3 323 aaPredicted RBP8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 COL18A1P39060 1754 aa8.9□□□□□ -0.99
CRNKL1-202ENST00000377340 MIF4GDA9UHW6 222 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 BCAT1P54687 386 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 TWF1Q12792 350 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PPIGQ13427 754 aaKnown RBP eCLIP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 THOC5Q13769 683 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 USP38Q8NB14 1042 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ALKBH8Q96BT7 664 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 MS4A4AQ96JQ5 239 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ERGIC2Q96RQ1 377 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 DDX50Q9BQ39 737 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 TLE6Q9H808 572 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 GPATCH2LQ9NWQ4 482 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 VPS18Q9P253 973 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 DPP7Q9UHL4 492 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 SF3B1O75533 1304 aaKnown RBP eCLIP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 EIF3CLB5ME19 914 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 VIMP08670 466 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CLTBP09497 229 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 RRM1P23921 792 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 MXRA7P84157 204 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ADIGQ0VDE8 80 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PSMD6Q15008 389 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 TAOK1Q7L7X3 1001 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PDIK1LQ8N165 341 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PPP4R1Q8TF05 950 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PBKQ96KB5 322 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 EIF3CQ99613 913 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 DHX33Q9H6R0 707 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CACNG4Q9UBN1 327 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 C5P01031 1676 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 OR4Q2P0C623 313 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 MYBL1P10243 752 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 KRT33BQ14525 404 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ZBTB41Q5SVQ8 909 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 FBXO46Q6PJ61 603 aaPredicted RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ARHGEF19Q8IW93 802 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 EFHBQ8N7U6 833 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CDKL2Q92772 493 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP2A3Q93084 1043 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 PLCD4Q9BRC7 762 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 THAP2Q9H0W7 228 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 XPNPEP1Q9NQW7 623 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 UMODL1Q5DID0 1318 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 GOLGA6L7A0A1B0GV03 622 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 TSPAN3O60637 253 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 SLC11A2P49281 568 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CEP85LQ5SZL2 805 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 HDXQ7Z353 690 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CPLX4Q7Z7G2 160 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 CFAP36Q96G28 342 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 SARS2Q9NP81 518 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 WRAP73Q9P2S5 460 aaPredicted RBP8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 TBK1Q9UHD2 729 aa8.89□□□□□ -0.99
CRNKL1-202ENST00000377340 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 USP27XA6NNY8 438 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 EEF2KO00418 725 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP9BO43861 1147 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 LGR5O75473 907 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 GPD1P21695 349 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 ATICP31939 592 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 SLCO1A2P46721 670 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 COG7P83436 770 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 DR1Q01658 176 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CCDC85BQ15834 202 aaPredicted RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 HHATQ5VTY9 493 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 ATAD1Q8NBU5 361 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CYP3A43Q9HB55 503 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 MRPS23Q9Y3D9 190 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 KDM3BQ7LBC6 1761 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 LOC102724159A0A0B4J2E5 919 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms