RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TFDP1Q14186 410 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 CDO1Q16878 200 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 EEF1DP3Q658K8 133 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 KIRREL3Q8IZU9 778 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 COPS5Q92905 334 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 METTL5Q9NRN9 209 aaKnown RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 CYTH4Q9UIA0 394 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ADAMTS5Q9UNA0 930 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ARIH2O95376 493 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 KRT16P08779 473 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 CDKN2BP42772 138 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ZC3H18Q86VM9 953 aaKnown RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ECHDC2Q86YB7 292 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 WDR49Q8IV35 697 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 KIAA0319LQ8IZA0 1049 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 MAML1Q92585 1016 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 MAGEB18Q96M61 343 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 GRID1Q9ULK0 1009 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 MGRN1O60291 552 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 COPS2P61201 443 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 PPP1R21Q6ZMI0 780 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 CENPUQ71F23 418 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 TRABD2AQ86V40 505 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 FAM71DQ8N9W8 422 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 SOWAHBA6NEL2 793 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 PIGRP01833 764 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 NQO1P15559 274 aaKnown RBP17.09■□□□□ 0.33
TRIM27-202ENST00000377199 KRT4P19013 534 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ZNF132P52740 706 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 HIF1AQ16665 826 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 MSS51Q4VC12 460 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ZNF449Q6P9G9 518 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
TRIM27-202ENST00000377199 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 OGTO15294 1046 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 LRCH4O75427 683 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ATG7O95352 703 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
TRIM27-202ENST00000377199 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
TRIM27-202ENST00000377199 SLC1A5Q15758 541 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 FNBP1LQ5T0N5 605 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 PYROXD1Q8WU10 500 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 ERP27Q96DN0 273 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
TRIM27-202ENST00000377199 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 GINM1Q9NU53 330 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 LGALS13Q9UHV8 139 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
TRIM27-202ENST00000377199 TNNC2P02585 160 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 SEPT7Q16181 437 aaKnown RBP17.08■□□□□ 0.33
TRIM27-202ENST00000377199 RNASEH2BQ5TBB1 312 aaKnown RBP17.08■□□□□ 0.33
TRIM27-202ENST00000377199 SH3PXD2AQ5TCZ1 1133 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 HHATQ5VTY9 493 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 UBA3Q8TBC4 463 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.33
TRIM27-202ENST00000377199 MAFO75444 373 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 ABCD1P33897 745 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 RFC5P40937 340 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 ASPAP45381 313 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 MMRN1Q13201 1228 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 PIGHQ14442 188 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 OASLQ15646 514 aaKnown RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 NPNTQ6UXI9 565 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 C3orf62Q6ZUJ4 267 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 ARFGAP1Q8N6T3 406 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 TWNKQ96RR1 684 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 MAK16Q9BXY0 300 aaKnown RBP17.08■□□□□ 0.32
TRIM27-202ENST00000377199 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 PHIPQ8WWQ0 1821 aa17.08■□□□□ 0.32
TRIM27-202ENST00000377199 GSTA1P08263 222 aa17.07■□□□□ 0.32
TRIM27-202ENST00000377199 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
TRIM27-202ENST00000377199 OVGP1Q12889 678 aa17.07■□□□□ 0.32
TRIM27-202ENST00000377199 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
TRIM27-202ENST00000377199 MTFR1Q15390 333 aa17.07■□□□□ 0.32
TRIM27-202ENST00000377199 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms