RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CFAP221Q4G0U5 840 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 RSPO2Q6UXX9 243 aaPredicted RBP13.23□□□□□ -0.29
VRK3-202ENST00000377011 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 SLC22A17Q8WUG5 538 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 KLHL5Q96PQ7 755 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 CBWD1Q9BRT8 395 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 MSTO1Q9BUK6 570 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 HERC2P3Q9BVR0 1158 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 FAM204AQ9H8W3 233 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 OLFML3Q9NRN5 406 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 CHST7Q9NS84 486 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 TMEM51Q9NW97 253 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 FEZ2Q9UHY8 353 aaPredicted RBP13.23□□□□□ -0.29
VRK3-202ENST00000377011 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 A6NNZ2 444 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 TEX28O15482 410 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 KCNE1P15382 129 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 TUBB8Q3ZCM7 444 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 TDRD12Q587J7 1177 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
VRK3-202ENST00000377011 RSPH1Q8WYR4 309 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SAAL1Q96ER3 474 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 TLR10Q9BXR5 811 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 S1PR5Q9H228 398 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 PCIF1Q9H4Z3 704 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 STIM2Q9P246 746 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 CPSF3Q9UKF6 684 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 STYXL1Q9Y6J8 313 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SCN1AP35498 2009 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GOLGA8KD6RF30 607 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 TADA2AO75478 443 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 NFICP08651 508 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GAP43P17677 238 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GYS2P54840 703 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 APBA1Q02410 837 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 IFI16Q16666 785 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 KLHDC7AQ5VTJ3 777 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 SRLQ86TD4 932 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 UHRF1Q96T88 793 aaPredicted RBP13.22□□□□□ -0.29
VRK3-202ENST00000377011 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 GANQ9H2C0 597 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 RASSF4Q9H2L5 321 aa13.22□□□□□ -0.29
VRK3-202ENST00000377011 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
VRK3-202ENST00000377011 GOLGA6BA6NDN3 693 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 PDXKO00764 312 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 OGTO15294 1046 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 OPA1O60313 960 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 SHOX2O60902 331 aaPredicted RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 B3GAT3O94766 335 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 CLCN4P51793 760 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 DSG1Q02413 1049 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 ASIC2Q16515 512 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 JADE1Q6IE81 842 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 CEP57Q86XR8 500 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 FAM212AQ96EL1 285 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 SH3GL2Q99962 352 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.3
VRK3-202ENST00000377011 CD207Q9UJ71 328 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 DAAM1Q9Y4D1 1078 aa13.21□□□□□ -0.3
VRK3-202ENST00000377011 H0YCG3 227 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 PODXLO00592 558 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
VRK3-202ENST00000377011 ADRB2P07550 413 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 CLTAP09496 248 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 GLUD2P49448 558 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 TMEM184AQ6ZMB5 413 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
VRK3-202ENST00000377011 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
VRK3-202ENST00000377011 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms