RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CDC25CP30307 473 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 FKBP3Q00688 224 aaKnown RBP23.64■■□□□ 1.37
SRM-201ENST00000376957 LRRC63Q05C16 580 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 ZACNQ401N2 412 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 CFAP221Q4G0U5 840 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 LIMS2Q7Z4I7 341 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 HS6ST3Q8IZP7 471 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 FGF14Q92915 247 aa23.64■■□□□ 1.37
SRM-201ENST00000376957 MAGEC2Q9UBF1 373 aaPredicted RBP23.64■■□□□ 1.37
SRM-201ENST00000376957 STK25O00506 426 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 CFHP08603 1231 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 PDGFRBP09619 1106 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 CSH1P0DML2 217 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 CSH2P0DML3 217 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 PIK3CAP42336 1068 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 SV2AQ7L0J3 742 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 TTC9BQ8N6N2 239 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 ELSPBP1Q96BH3 223 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 TCEAL4Q96EI5 215 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 DHTKD1Q96HY7 919 aaPredicted RBP23.63■■□□□ 1.37
SRM-201ENST00000376957 DNAJC25Q9H1X3 360 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 ATXN3LQ9H3M9 355 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 SLC2A4RGQ9NR83 387 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 EHD2Q9NZN4 543 aa23.63■■□□□ 1.37
SRM-201ENST00000376957 UXTQ9UBK9 157 aaPredicted RBP23.63■■□□□ 1.37
SRM-201ENST00000376957 A0A1W2PRU2 124 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 A8MXQ7 604 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 SOAT2O75908 522 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 GTF2H1P32780 548 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 DLG4P78352 724 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 ZCWPW2Q504Y3 356 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 PLEKHO2Q8TD55 490 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 KBTBD7Q8WVZ9 684 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 SMARCD2Q92925 531 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 SHDQ96IW2 340 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 TNIP3Q96KP6 325 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 CEP295NLQ96MC4 621 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 GZF1Q9H116 711 aaPredicted RBP23.62■■□□□ 1.37
SRM-201ENST00000376957 TECTAO75443 2155 aa23.62■■□□□ 1.37
SRM-201ENST00000376957 NOTCH4Q99466 2003 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 GADD45BO75293 160 aaPredicted RBP23.61■■□□□ 1.37
SRM-201ENST00000376957 ANXA13P27216 316 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 GABRR2P28476 465 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 CYP27A1Q02318 531 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 TEAD2Q15562 447 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 SCARA3Q6AZY7 606 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 FAM171BQ6P995 826 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 VSTM1Q6UX27 236 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 OSTM1Q86WC4 334 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 ADSSL1Q8N142 457 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 SIX5Q8N196 739 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 GIPC2Q8TF65 315 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 ERCC4Q92889 916 aaPredicted RBP23.61■■□□□ 1.37
SRM-201ENST00000376957 KXD1Q9BQD3 176 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 LPIN3Q9BQK8 851 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 XYLT2Q9H1B5 865 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 SMOC2Q9H3U7 446 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 TMLHEQ9NVH6 421 aa23.61■■□□□ 1.37
SRM-201ENST00000376957 BICDL2A1A5D9 508 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 DPYSL4O14531 572 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 SLC16A3O15427 465 aaKnown RBP23.6■■□□□ 1.37
SRM-201ENST00000376957 NARSO43776 548 aaKnown RBP23.6■■□□□ 1.37
SRM-201ENST00000376957 ATF6P18850 670 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 CYP2F1P24903 491 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 LMO2P25791 158 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 CCR2P41597 374 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 MAGEA11P43364 429 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 NUBP1P53384 320 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 KRT39Q6A163 491 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 TMC8Q8IU68 726 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 SCN4BQ8IWT1 228 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 SHKBP1Q8TBC3 707 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 ZSCAN18Q8TBC5 510 aaPredicted RBP23.6■■□□□ 1.37
SRM-201ENST00000376957 MYCBPAPQ8TBZ2 947 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 ASB16Q96NS5 453 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 MRPL45Q9BRJ2 306 aaKnown RBP23.6■■□□□ 1.37
SRM-201ENST00000376957 LRRC3Q9BY71 257 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 TMEM8AQ9HCN3 771 aa23.6■■□□□ 1.37
SRM-201ENST00000376957 ATP8B3O60423 1300 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 MYBPHLA2RUH7 354 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 TRIM66O15016 1216 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 GJA1P17302 382 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 PTPN1P18031 435 aaKnown RBP23.59■■□□□ 1.37
SRM-201ENST00000376957 CCNE1P24864 410 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 GRIK1P39086 918 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 GCLMP48507 274 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 CDR1P51861 262 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 PSMC1P62191 440 aaKnown RBP23.59■■□□□ 1.37
SRM-201ENST00000376957 FAM78AQ5JUQ0 283 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 YAF2Q8IY57 180 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 FLCNQ8NFG4 579 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 GPR152Q8TDT2 470 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 PKMYT1Q99640 499 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 METTL14Q9HCE5 456 aaKnown RBP23.59■■□□□ 1.37
SRM-201ENST00000376957 MAN1B1Q9UKM7 699 aa23.59■■□□□ 1.37
SRM-201ENST00000376957 MAGED2Q9UNF1 606 aaPredicted RBP23.59■■□□□ 1.37
SRM-201ENST00000376957 SOBPA7XYQ1 873 aa23.58■■□□□ 1.37
SRM-201ENST00000376957 DDX6P26196 483 aaKnown RBP eCLIP23.58■■□□□ 1.37
SRM-201ENST00000376957 CLCN5P51795 746 aa23.58■■□□□ 1.37
SRM-201ENST00000376957 GPC5P78333 572 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms