RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 KCNMB3Q9NPA1 279 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 NRBP2Q9NSY0 501 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 TRMT13Q9NUP7 481 aaKnown RBP6.22□□□□□ -1.41
SSX1-201ENST00000376919 GTF2IRD1Q9UHL9 959 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 TUBE1Q9UJT0 475 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 RNF112Q9ULX5 631 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 FAM50BQ9Y247 325 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 PCDHB6Q9Y5E3 794 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 ATP6V1DQ9Y5K8 247 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 SCN10AQ9Y5Y9 1956 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 NRCAMQ92823 1304 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 IGSF9BQ9UPX0 1349 aa6.22□□□□□ -1.41
SSX1-201ENST00000376919 COL1A2P08123 1366 aa6.21□□□□□ -1.41
SSX1-201ENST00000376919 RRN3P2A6NIE6 340 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 F8W735 103 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 HBP1O60381 514 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 PSMD10O75832 226 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 TIAF1O95411 115 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 IL33O95760 270 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 ZSCAN22P10073 491 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 CYP2C9P11712 490 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 ATP2A2P16615 1042 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 TMOD1P28289 359 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 THPOP40225 353 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 CCT6AP40227 531 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 QARSP47897 775 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 RGS19P49795 217 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 POLGP54098 1239 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 PSMC5P62195 406 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 SOX4Q06945 474 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 CYP4F3Q08477 520 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 RESTQ13127 1097 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 CTTNQ14247 550 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 SNX17Q15036 470 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 PLCB4Q15147 1175 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 KRT79Q5XKE5 535 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 PGM2L1Q6PCE3 622 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 SHISA2Q6UWI4 295 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 ABHD15Q6UXT9 468 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 OTUD6AQ7L8S5 288 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 PLPPR4Q7Z2D5 763 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 ANKRD33Q7Z3H0 272 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 TMEM199Q8N511 208 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 METTL13Q8N6R0 699 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 AFAP1L1Q8TED9 768 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 ATP8B4Q8TF62 1192 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 LMBR1Q8WVP7 490 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 KAT2BQ92831 832 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 DYDC2Q96IM9 177 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 MBOAT7Q96N66 472 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 TOX2Q96NM4 488 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 MAP7D2Q96T17 732 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 LXNQ9BS40 222 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 FTOQ9C0B1 505 aaKnown RBP eCLIP6.21□□□□□ -1.42
SSX1-201ENST00000376919 FAM49AQ9H0Q0 323 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 TMEM60Q9H2L4 133 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 RNPEPQ9H4A4 650 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 GSX1Q9H4S2 264 aaPredicted RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 SSU72Q9NP77 194 aaKnown RBP6.21□□□□□ -1.42
SSX1-201ENST00000376919 PDLIM7Q9NR12 457 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 GPR27Q9NS67 375 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 C1orf112Q9NSG2 853 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 SETD4Q9NVD3 440 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 C14orf119Q9NWQ9 140 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 LRWD1Q9UFC0 647 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 MTMR6Q9Y217 621 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 GINS2Q9Y248 185 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 COQ6Q9Y2Z9 468 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 TELO2Q9Y4R8 837 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 NPFFR2Q9Y5X5 522 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
SSX1-201ENST00000376919 DNAH12Q6ZR08 3092 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 ARHGEF35A5YM69 484 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 H0YGN5 161 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 HAS3O00219 553 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 PMM2O15305 246 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 DHX15O43143 795 aaKnown RBP6.2□□□□□ -1.42
SSX1-201ENST00000376919 RPLP2P05387 115 aaKnown RBP6.2□□□□□ -1.42
SSX1-201ENST00000376919 CKMP06732 381 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 DRD2P14416 443 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 INSRRP14616 1297 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 SERPINB3P29508 390 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 YWHABP31946 246 aaKnown RBP6.2□□□□□ -1.42
SSX1-201ENST00000376919 ETV3P41162 512 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 PRPHP41219 470 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 DNM2P50570 870 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 MECP2P51608 486 aaKnown RBP6.2□□□□□ -1.42
SSX1-201ENST00000376919 CCL23P55773 120 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 NUCB2P80303 420 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 ATP2C1P98194 919 aaPredicted RBP6.2□□□□□ -1.42
SSX1-201ENST00000376919 FPGSQ05932 587 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 PAK1Q13153 545 aa6.2□□□□□ -1.42
SSX1-201ENST00000376919 PPIGQ13427 754 aaKnown RBP eCLIP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms