RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GPR25O00155 361 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 MGRN1O60291 552 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 CILPO75339 1184 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ASMTLO95671 621 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 CALB1P05937 261 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ALADP13716 330 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 RAB6CQ53S08 254 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 IZUMO3Q5VZ72 239 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ANKS4BQ8N8V4 417 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 CLMNQ96JQ2 1002 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FOXP3Q9BZS1 431 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 RAB6CQ9H0N0 254 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 NUMBLQ9Y6R0 609 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TMEM120BA0PK00 339 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ACSL3O95573 720 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 NFICP08651 508 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 RPL34P49207 117 aaKnown RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 PPARDQ03181 441 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 MXD4Q14582 209 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TRIP13Q15645 432 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SGSM1Q2NKQ1 1148 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 P3H1Q32P28 736 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TFDP3Q5H9I0 405 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SWT1Q5T5J6 900 aaKnown RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TRABD2AQ86V40 505 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 TRAPPC12Q8WVT3 735 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 FAM167AQ96KS9 214 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 ACTR5Q9H9F9 607 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-202ENST00000376659 SLC40A1Q9NP59 571 aa10.13□□□□□ -0.79
TRIM39-202ENST00000376659 CCT8L1PA6NM43 557 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 GSTA1P08263 222 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 CD48P09326 243 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 WEE2P0C1S8 567 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ATF2P15336 505 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PSMC4P43686 418 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RAP1GAPP47736 663 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 FAM160B1Q5W0V3 765 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 MAP1SQ66K74 1059 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RTP4Q96DX8 246 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RBM41Q96IZ5 413 aaKnown RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ABCF3Q9NUQ8 709 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 NAALADL1Q9UQQ1 740 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ALOX15BO15296 676 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PECAM1P16284 738 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RFC1P35251 1148 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 GPD2P43304 727 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 TAP1Q03518 808 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ACVR2BQ13705 512 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 MORF4L2Q15014 288 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 NBPF20Q3BBV1 942 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 LIN9Q5TKA1 542 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ANKRD22Q5VYY1 191 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 LRRC71Q8N4P6 559 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 CMASQ8NFW8 434 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 UHMK1Q8TAS1 419 aaKnown RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 COPS5Q92905 334 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PIWIL1Q96J94 861 aaKnown RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 CENPHQ9H3R5 247 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RNPEPQ9H4A4 650 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PCDH9Q9HC56 1237 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PGK2P07205 417 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 TAC1P20366 129 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 IL4RP24394 825 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 IFFO1Q0D2I5 559 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 PPP1R7Q15435 360 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 BBS12Q6ZW61 710 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 FUKQ8N0W3 1084 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ANKRD35Q8N283 1001 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 RIBC1Q8N443 379 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-202ENST00000376659 CPT1BQ92523 772 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 USP6NLQ92738 828 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 ANAPC5Q9UJX4 755 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 SHOC2Q9UQ13 582 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 HTTP42858 3142 aa10.12□□□□□ -0.79
TRIM39-202ENST00000376659 TCRBV7S3A2A0A539 114 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 PIGHQ14442 188 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 TAF5Q15542 800 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 SKIDA1Q1XH10 827 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ZNF792Q3KQV3 632 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 FNBP1LQ5T0N5 605 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 MAGEC3Q8TD91 643 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ACSF2Q96CM8 615 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 IMPG2Q9BZV3 1241 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 SSU72Q9NP77 194 aaKnown RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CAPN7Q9Y6W3 813 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CXCL8P10145 99 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CCNB1P14635 433 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms