RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HOXA6P31267 233 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 NASPP49321 788 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 SNRPFP62306 86 aaKnown RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 CYP4F8P98187 520 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 ZNF268Q14587 947 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 CFAP221Q4G0U5 840 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 INTS6LQ5JSJ4 861 aaKnown RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 C4orf50Q6ZRC1 276 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 LONP2Q86WA8 852 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 TMEM130Q8N3G9 435 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 PDCL2Q8N4E4 241 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 C1orf127Q8N9H9 656 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 CCDC26Q8TAB7 109 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 GIPC2Q8TF65 315 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 RSPRY1Q96DX4 576 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 SAAL1Q96ER3 474 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 TRMT2BQ96GJ1 504 aaKnown RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 MAGEF1Q9HAY2 307 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 IL21Q9HBE4 155 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 CDV3Q9UKY7 258 aaKnown RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 USP18Q9UMW8 372 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 TICRRQ7Z2Z1 1910 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 COL4A2P08572 1712 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 DMDP11532 3685 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 NUP210Q8TEM1 1887 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-204ENST00000376643 ZNF292O60281 2723 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDAC6-204ENST00000376643 STX6O43752 255 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 PPP6R2O75170 966 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 RETP07949 1114 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 NLRP12P59046 1061 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 GRSF1Q12849 480 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDAC6-204ENST00000376643 PDGFRLQ15198 375 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 LRRTM3Q86VH5 581 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 MON1AQ86VX9 555 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 SPATA2LQ8IUW3 424 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-204ENST00000376643 ADGRF2Q8IZF7 708 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 DCLK2Q8N568 766 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 IQUBQ8NA54 791 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 NOC3LQ8WTT2 800 aaKnown RBP15.84■□□□□ 0.13
HDAC6-204ENST00000376643 USP28Q96RU2 1077 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 SLC46A2Q9BY10 475 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 TDP1Q9NUW8 608 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 GTSE1Q9NYZ3 720 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 SNX9Q9Y5X1 595 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 UBE4BO95155 1302 aa15.84■□□□□ 0.13
HDAC6-204ENST00000376643 COL4A3Q01955 1670 aa15.83■□□□□ 0.13
HDAC6-204ENST00000376643 K7ELQ4 463 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-204ENST00000376643 PRAMEF12O95522 483 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 PFKLP17858 780 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 SATB1Q01826 763 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 KCNA1Q09470 495 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 SIM2Q14190 667 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-204ENST00000376643 DUOXA2Q1HG44 320 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 FBXO43Q4G163 708 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 PRR23BQ6ZRT6 265 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 MAB21L3Q8N8X9 362 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 MYRFLQ96LU7 910 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 RTKNQ9BST9 563 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 PI4K2AQ9BTU6 479 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 L1RE1Q9UN81 338 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 MAGED2Q9UNF1 606 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-204ENST00000376643 NCANO14594 1321 aa15.83■□□□□ 0.12
HDAC6-204ENST00000376643 ANK1P16157 1881 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 SCN1AP35498 2009 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CCDC163A0A0D9SF12 145 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 SPTLC2O15270 562 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 NOL4O94818 638 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 YEATS4O95619 227 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 F11P03951 625 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 HMGA1P17096 107 aaKnown RBP15.82■□□□□ 0.12
HDAC6-204ENST00000376643 MAGEA11P43364 429 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CASP5P51878 434 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 FAM160A1Q05DH4 1040 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 RUNX3Q13761 415 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CCINQ13939 588 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 PON2Q15165 354 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 RSPO4Q2I0M5 234 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-204ENST00000376643 VSTM1Q6UX27 236 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 HS2ST1Q7LGA3 356 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-204ENST00000376643 WDR49Q8IV35 697 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CPA6Q8N4T0 437 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 PDILTQ8N807 584 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 LINC00301Q8NCQ3 95 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 ZFYVE19Q96K21 471 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 FAM83CQ9BQN1 747 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 MTMR12Q9C0I1 747 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 PDE11AQ9HCR9 933 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 GKN1Q9NS71 199 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CGNQ9P2M7 1197 aaKnown RBP15.82■□□□□ 0.12
HDAC6-204ENST00000376643 CDH9Q9ULB4 789 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 TCHHQ07283 1943 aa15.82■□□□□ 0.12
HDAC6-204ENST00000376643 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 CACNA1AO00555 2505 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms