RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 TXNDC11Q6PKC3 985 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 STXBP4Q6ZWJ1 553 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 LONP2Q86WA8 852 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 PDCL2Q8N4E4 241 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 CSGALNACT2Q8N6G5 542 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 LRRC52Q8N7C0 313 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 ACBD6Q9BR61 282 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 PI4K2AQ9BTU6 479 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 SLC46A2Q9BY10 475 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 SMG9Q9H0W8 520 aaKnown RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 KIF9Q9HAQ2 790 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 PANK4Q9NVE7 773 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 DDX43Q9NXZ2 648 aaKnown RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 UXTQ9UBK9 157 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 MAGED2Q9UNF1 606 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 KIF26AQ9ULI4 1882 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 MED19A0JLT2 244 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-202ENST00000376610 SOBPA7XYQ1 873 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 CHURC1-FNTBB4DL54 471 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 EXTL3O43909 919 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 RETP07949 1114 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 TMEM191BP0C7N4 346 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 FNTBP49356 437 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 NLRP12P59046 1061 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 RBP5P82980 135 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 TNK2Q07912 1038 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 FAM173BQ6P4H8 233 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 Q6ZS52 159 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 CCDC65Q8IXS2 484 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 MAB21L3Q8N8X9 362 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
HDAC6-202ENST00000376610 PANK2Q9BZ23 570 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 LRRC27Q9C0I9 530 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 ABCB6Q9NP58 842 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 L1RE1Q9UN81 338 aa19.87■□□□□ 0.77
HDAC6-202ENST00000376610 GOLGA8IPA6NC78 632 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 GOLGA8JA6NMD2 632 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 KIAA0391O15091 583 aaKnown RBP19.86■□□□□ 0.77
HDAC6-202ENST00000376610 LHX1P48742 406 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 MYO1EQ12965 1108 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 CCINQ13939 588 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 SLC39A14Q15043 492 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 HEATR6Q6AI08 1181 aaKnown RBP19.86■□□□□ 0.77
HDAC6-202ENST00000376610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.86■□□□□ 0.77
HDAC6-202ENST00000376610 GPD1LQ8N335 351 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 SPATA18Q8TC71 538 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 EXOC4Q96A65 974 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 ANKRD36BP1Q96IX9 119 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 ZSCAN16Q9H4T2 348 aaPredicted RBP19.86■□□□□ 0.77
HDAC6-202ENST00000376610 GKN1Q9NS71 199 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 TDP1Q9NUW8 608 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 SNX9Q9Y5X1 595 aa19.86■□□□□ 0.77
HDAC6-202ENST00000376610 MORC2Q9Y6X9 1032 aaPredicted RBP19.86■□□□□ 0.77
HDAC6-202ENST00000376610 RALGAPA1Q6GYQ0 2036 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 FRMD3A2A2Y4 597 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 LRP3O75074 770 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 F11P03951 625 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 HMGA1P17096 107 aaKnown RBP19.85■□□□□ 0.77
HDAC6-202ENST00000376610 PCSK1P29120 753 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 CASP5P51878 434 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 SPEM2Q0P670 501 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 GRSF1Q12849 480 aaKnown RBP eCLIP19.85■□□□□ 0.77
HDAC6-202ENST00000376610 INTS6LQ5JSJ4 861 aaKnown RBP19.85■□□□□ 0.77
HDAC6-202ENST00000376610 CEP68Q76N32 757 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 MON1AQ86VX9 555 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 SPATA2LQ8IUW3 424 aaPredicted RBP19.85■□□□□ 0.77
HDAC6-202ENST00000376610 ADGRF2Q8IZF7 708 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 TOP6BLQ8N6T0 577 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 PDILTQ8N807 584 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 ZSWIM2Q8NEG5 633 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 INTS4Q96HW7 963 aaKnown RBP19.85■□□□□ 0.77
HDAC6-202ENST00000376610 CBWD1Q9BRT8 395 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 PCIF1Q9H4Z3 704 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 TMLHEQ9NVH6 421 aa19.85■□□□□ 0.77
HDAC6-202ENST00000376610 OBSL1O75147 1896 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 K7ESF4 209 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 PRPF6O94906 941 aaKnown RBP19.84■□□□□ 0.77
HDAC6-202ENST00000376610 TNNC2P02585 160 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 ACAT1P24752 427 aaKnown RBP19.84■□□□□ 0.77
HDAC6-202ENST00000376610 GPR15P49685 360 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 RUNX3Q13761 415 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 STK38Q15208 465 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 SURF1Q15526 300 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 DDR2Q16832 855 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 TXNDC8Q6A555 127 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 TMEM150AQ86TG1 271 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 USP13Q92995 863 aaPredicted RBP19.84■□□□□ 0.77
HDAC6-202ENST00000376610 USP28Q96RU2 1077 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 FAM83CQ9BQN1 747 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 RTKNQ9BST9 563 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 MTMR12Q9C0I1 747 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 PDE11AQ9HCR9 933 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 GDAP2Q9NXN4 497 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 CCL26Q9Y258 94 aa19.84■□□□□ 0.77
HDAC6-202ENST00000376610 ATG13O75143 517 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 CYP2F1P24903 491 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 ATXN1P54253 815 aaKnown RBP19.83■□□□□ 0.77
HDAC6-202ENST00000376610 WNT7BP56706 349 aa19.83■□□□□ 0.77
HDAC6-202ENST00000376610 DMWDQ09019 674 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms