RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 GAP43P17677 238 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 SDHBP21912 280 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 TFAMQ00059 246 aaKnown RBP16.09■□□□□ 0.17
CLCN6-204ENST00000376491 ITPRIPL2Q3MIP1 535 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 SDHAF4Q5VUM1 108 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 RRAGBQ5VZM2 374 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 PKN3Q6P5Z2 889 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 LONP2Q86WA8 852 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
CLCN6-204ENST00000376491 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 CDV3Q9UKY7 258 aaKnown RBP16.09■□□□□ 0.17
CLCN6-204ENST00000376491 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 AGAP1Q9UPQ3 857 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 EXOC7Q9UPT5 735 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 PCDHB5Q9Y5E4 795 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.09■□□□□ 0.17
CLCN6-204ENST00000376491 GREB1Q4ZG55 1949 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 EML5Q05BV3 1969 aa16.09■□□□□ 0.17
CLCN6-204ENST00000376491 A0A087X0B3 334 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 FRMD3A2A2Y4 597 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 DCDC2BA2VCK2 349 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 PRPF40AO75400 957 aaKnown RBP16.08■□□□□ 0.16
CLCN6-204ENST00000376491 TADA3O75528 432 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 GCNT3O95395 438 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
CLCN6-204ENST00000376491 CNR2P34972 360 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 PNPLA4P41247 253 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.16
CLCN6-204ENST00000376491 CCDC142Q17RM4 750 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 TXNDC8Q6A555 127 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 OSTM1Q86WC4 334 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 PKMYT1Q99640 499 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 EBF3Q9H4W6 596 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 OLFML3Q9NRN5 406 aa16.08■□□□□ 0.16
CLCN6-204ENST00000376491 THG1LQ9NWX6 298 aaKnown RBP16.08■□□□□ 0.16
CLCN6-204ENST00000376491 DDX43Q9NXZ2 648 aaKnown RBP16.08■□□□□ 0.16
CLCN6-204ENST00000376491 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
CLCN6-204ENST00000376491 HCRTO43612 131 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 EXTL3O43909 919 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 IDEP14735 1019 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 GARTP22102 1010 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 CYP2F1P24903 491 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 HOXA6P31267 233 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 TSPY1Q01534 308 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 RUNX3Q13761 415 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 DDR2Q16832 855 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 INTS6LQ5JSJ4 861 aaKnown RBP16.07■□□□□ 0.16
CLCN6-204ENST00000376491 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 SYNPOQ8N3V7 929 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
CLCN6-204ENST00000376491 ACBD6Q9BR61 282 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 PDE11AQ9HCR9 933 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 SEMA4GQ9NTN9 838 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 RBAKQ9NYW8 714 aaPredicted RBP16.07■□□□□ 0.16
CLCN6-204ENST00000376491 SIX4Q9UIU6 781 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 ZMYM5Q9UJ78 669 aa16.07■□□□□ 0.16
CLCN6-204ENST00000376491 MAGED2Q9UNF1 606 aaPredicted RBP16.07■□□□□ 0.16
CLCN6-204ENST00000376491 TPRP12270 2363 aaKnown RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 MYO16Q9Y6X6 1858 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 LRP3O75074 770 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 CSH1P0DML2 217 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 CSH2P0DML3 217 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 ARSAP15289 507 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 SYT1P21579 422 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 DDX6P26196 483 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 AVPR1AP37288 418 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 BFSP1Q12934 665 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 NFE2Q16621 373 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 MON1AQ86VX9 555 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 WDR5BQ86VZ2 330 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 LRRC52Q8N7C0 313 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 CACTINQ8WUQ7 758 aaKnown RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 FBRSL1Q9HCM7 1045 aaKnown RBP16.06■□□□□ 0.16
CLCN6-204ENST00000376491 TDP1Q9NUW8 608 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 GTF3C4Q9UKN8 822 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
CLCN6-204ENST00000376491 SOBPA7XYQ1 873 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 GABRDO14764 452 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 HUS1O60921 280 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 NOL4O94818 638 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 PDCP20941 246 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 TXLNAP40222 546 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms