RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 ACAD11Q709F0 780 aa18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 BBOF1Q8ND07 529 aa18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 TRIM55Q9BYV6 548 aa18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 TDRD3Q9H7E2 651 aaKnown RBP18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 FBXO6Q9NRD1 293 aaPredicted RBP18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 SPATA31A6Q5VVP1 1343 aa18.88■□□□□ 0.61
TUBGCP3-202ENST00000375669 POLR2MP0CAP2 368 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 MAGEA10P43363 369 aaPredicted RBP18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 ARFIP2P53365 341 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SPP2Q13103 211 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SCARA3Q6AZY7 606 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 IL31RAQ8NI17 732 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SKA1Q96BD8 255 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 NMD3Q96D46 503 aaKnown RBP18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 C8orf37Q96NL8 207 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 ACCSQ96QU6 501 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 ATP9BO43861 1147 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 RFX1P22670 979 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 GRIA2P42262 883 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 AP2B1P63010 937 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 GPS1Q13098 491 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 MIER3Q7Z3K6 550 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 MCOLN2Q8IZK6 566 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SMIM31A0A1B0GVY4 71 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 MAGEC1O60732 1142 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 BBOX1O75936 387 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 CPA2P48052 419 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 STAT2P52630 851 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 CDK16Q00536 496 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 PLCB3Q01970 1234 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 UGCGQ16739 394 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 CLEC16AQ2KHT3 1053 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 SV2AQ7L0J3 742 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 RAB20Q9NX57 234 aa18.87■□□□□ 0.61
TUBGCP3-202ENST00000375669 BAG2O95816 211 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 SSTR1P30872 391 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 ARSEP51690 589 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 HNRNPDQ14103 355 aaKnown RBP18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 KRT39Q6A163 491 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 NET1Q7Z628 596 aaPredicted RBP18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 ANKRD23Q86SG2 305 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 TTC1Q99614 292 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 TEKT3Q9BXF9 490 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 COA1Q9GZY4 146 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 HOMER2Q9NSB8 354 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 DNAJB4Q9UDY4 337 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 MTO1Q9Y2Z2 717 aaKnown RBP18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 ZBED4O75132 1171 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 HARSP12081 509 aaKnown RBP18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 GYS1P13807 737 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 DSG3P32926 999 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 RARRES1P49788 294 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 NRLP54845 237 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 HPCAP84074 193 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 KLF1Q13351 362 aaPredicted RBP18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 TXNRD3NBQ6F5E7 133 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 SATL1Q86VE3 508 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 CCDC110Q8TBZ0 833 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 AGBL1Q96MI9 1066 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 NT5C1BQ96P26 610 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM121Q9BTD3 319 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 PHACTR1Q9C0D0 580 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 CLIC5Q9NZA1 410 aa18.86■□□□□ 0.61
TUBGCP3-202ENST00000375669 RPL7AP62424 266 aaKnown RBP18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 DYNLT1P63172 113 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 OLFML2BQ68BL8 750 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 RIPOR1Q6ZS17 1223 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 ZCCHC9Q8N567 271 aaKnown RBP18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM120AQ9BXJ8 343 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM206Q9H813 350 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 KCNH7Q9NS40 1196 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 SLC17A7Q9P2U7 560 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 PIM1P11309 404 aaPredicted RBP18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 MDH1BQ5I0G3 518 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 TTC7BQ86TV6 843 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 LRRC6Q86X45 466 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 CYTH2Q99418 400 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 KCNK13Q9HB14 408 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 NDUFA13Q9P0J0 144 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 ARMCX1Q9P291 453 aa18.85■□□□□ 0.61
TUBGCP3-202ENST00000375669 USP1O94782 785 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 OR6B1O95007 311 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 TMEM62Q0P6H9 643 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 PDIA2Q13087 525 aaKnown RBP18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 TRMT5Q32P41 509 aaKnown RBP18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 C6orf163Q5TEZ5 329 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 ZNF276Q8N554 614 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 FBXL13Q8NEE6 735 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 PANX3Q96QZ0 392 aa18.84■□□□□ 0.61
TUBGCP3-202ENST00000375669 PICK1Q9NRD5 415 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms