RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 USP37Q86T82 979 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 ARID3BQ8IVW6 561 aaPredicted RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 RBM12Q9NTZ6 932 aaKnown RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 MAP1BP46821 2468 aaKnown RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 CLDN3O15551 220 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 RHOBTB3O94955 611 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 GCNT3O95395 438 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 PIGRP01833 764 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
LSM2-208ENST00000375661 TYMPP19971 482 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 HOXD13P35453 343 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 MCL1Q07820 350 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 DUSP4Q13115 394 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 PSMD2Q13200 908 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 SRSF5Q13243 272 aaKnown RBP13.12□□□□□ -0.31
LSM2-208ENST00000375661 CCINQ13939 588 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 CAMK4Q16566 473 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 L1TD1Q5T7N2 865 aaKnown RBP13.12□□□□□ -0.31
LSM2-208ENST00000375661 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 Q6ZS52 159 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ITIH5Q86UX2 942 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 SCFD1Q8WVM8 642 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 PSMG2Q969U7 264 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
LSM2-208ENST00000375661 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ZMYM5Q9UJ78 669 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 ANGPTL2Q9UKU9 493 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 OBSL1O75147 1896 aa13.12□□□□□ -0.31
LSM2-208ENST00000375661 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 GDF9O60383 454 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 AKAP3O75969 853 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 CLTAP09496 248 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 CXCL8P10145 99 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 PMLP29590 882 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 SOX9P48436 509 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 SHC2P98077 582 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ALCAMQ13740 583 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ZBTB6Q15916 424 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 HEATR6Q6AI08 1181 aaKnown RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 DSTYKQ6XUX3 929 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 GAREM2Q75VX8 874 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 DNAJB7Q7Z6W7 309 aaPredicted RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 HAPLN2Q9GZV7 340 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ATXN3LQ9H3M9 355 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 THG1LQ9NWX6 298 aaKnown RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
LSM2-208ENST00000375661 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
LSM2-208ENST00000375661 MTMR11A4FU01 709 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 TISP43B9A030 160 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 TM4SF5O14894 197 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 EIF3DO15371 548 aaKnown RBP eCLIP13.1□□□□□ -0.31
LSM2-208ENST00000375661 ATG13O75143 517 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 EPN2O95208 641 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 SMC2O95347 1197 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 ABCD1P33897 745 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 RAP1GAPP47736 663 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 TUFMP49411 452 aaKnown RBP13.1□□□□□ -0.31
LSM2-208ENST00000375661 PPP2R3AQ06190 1150 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 PON2Q15165 354 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 OVOS1Q6IE37 1185 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 CRISPLD1Q9H336 500 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
LSM2-208ENST00000375661 MAN1B1Q9UKM7 699 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms